Gene Cpin_3616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3616 
Symbol 
ID8359783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4510407 
End bp4512119 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content49% 
IMG OID644965785 
Productpotassium-transporting ATPase subunit A 
Protein accessionYP_003123279 
Protein GI256422626 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2060] K+-transporting ATPase, A chain 
TIGRFAM ID[TIGR00680] K+-transporting ATPase, KdpA 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0764098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.000193876 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACAGCG AAATAACAGG TGTCATCCTC ACCTTTATAC TAACACTGGT GATCGCATTC 
CCGCTCGGAA AATATATCGC AAGAGTTTTC CAGGGTGAAC GCACTTTCAC AGACTTTCTG
AATCCCGTAG AGCGTTTTAT ATACCGTATC TGCGGTATCG ATCCTCATAA AGAGATGAAC
TGGAAGCAAC ACATGGCCGC CCTGTTATCC ATTAACCTGG TATGGCTCAT ATATGCCTTC
TTTATCTTGT TATTCCAGTC TCATCTCCCA CTCAATCCGG ATGGTAACCC GGATATGACA
CCGGATCTGG CCTTCAATAC AGCGATCAGT TTCCTTGTAA ACTGTAACCT GCAACACTAT
TCCGGTGAAA CCGGCGTTAC CTATCTTTCC CAGCTGATCG TAATCACCTT CCTGCAATTC
GTGTCCGCAG CAACGGGTGT TGCCGCAGTA GCAGTACTGT TCAGGGCCTT CGCTGATAAG
ACCACCGAGA AACTGGGTAA CTTCTTCGTA TTCTTCACCA AAACGATCAC CCGTATACTG
TTACCTCTCA GTATCATTAT GGCGATTACC CTGGCCTTCA ATGGTACGCC TGCAAGCTTT
GATGGCAAAG ACAGTATCGT CACACTGCAG GGTGATTCCG TACAGGTATC AAGAGGTCCT
GCTGCCGGCA TGATCGCCAT CAAACACCTC GGTACTAACG GTGGTGGATG GTTCGGCGCC
AACTCGGCAC ATCCGCTGGA AAATCCCAAC TACTTTACCA ACGTCGTTGA AATCGTTGCA
CAGGTAATCC TACCGATGGC GCTGATCTTT GCATTCGGTT TCTTCATCCG CAGAAGGAAA
CTGGGCTATG TCATCTTTGG CGTCATGACA GCAGGTATGT TGACGCTCAT GATACCGAAT
ATGATCTCTG AAATAAGCGG TAACCCTTTA CTGCACCACC TGGGTCTGAA AGACATCACG
GCCATGGAAG GTAAAGAGGT GCGTCTGGGT GTACCGGCAT CGGCTTACTG GCAGGTCATG
ACGACCATCA TCTCTACCGG TTCGATCAAC TCTATGCACG ACAGCTCTAT GCCGCTTTCA
GGCGCCATGC AGATGCTGGG TATGATGACC AACTGTTTCT ATGGTGGTAA AGGTGTGGGA
CTGCTGAACT ACTTTATATT CCTCATCATT GCGGTATTTA TCTCCGGACT GATGGTTGGT
CGTACACCAG AATTCATGGG ACGTAAAGTA GAAGCCAGGG AAATGAAAAT TGCGGCTATC
ATCGCTTTGT TCCATCCCTT CCTGATACTG GTGGGTACGG CCTTGTCAGC CTACTTTGCA
GCACATCACC CACAGATGGT ATGGTCCGTT CAACCGGCTA ACTGGTTCAA CAACCCATCC
AATCACGGCT TCTCTGAGAT GCTGTATGAA TATACTTCTT CCTCTGCCAA CAACGGCTCC
GGCTTTGAAG GTTTAGCAGA CAACAATATC TTCTGGAATA TCACAACAGG TATAGTGATG
ATACTCGGTC GATTTATCCC TATCATCGGA CCAGTCGCCA TCGCCGGTAT ACTGGCCAAA
AAGAAATATA TCCCTGAATC CGCGGGTACC CTGCAGACGG ACACCTCCAC ATTCGGTATC
ATGACTTACG CAGTCATCAT GATCGTTGCG GCACTGGCAT TCTTCCCTGC ACTGACCCTG
GGTCCTATCG CAGAATATTT CCAGTCCTAC TGA
 
Protein sequence
MNSEITGVIL TFILTLVIAF PLGKYIARVF QGERTFTDFL NPVERFIYRI CGIDPHKEMN 
WKQHMAALLS INLVWLIYAF FILLFQSHLP LNPDGNPDMT PDLAFNTAIS FLVNCNLQHY
SGETGVTYLS QLIVITFLQF VSAATGVAAV AVLFRAFADK TTEKLGNFFV FFTKTITRIL
LPLSIIMAIT LAFNGTPASF DGKDSIVTLQ GDSVQVSRGP AAGMIAIKHL GTNGGGWFGA
NSAHPLENPN YFTNVVEIVA QVILPMALIF AFGFFIRRRK LGYVIFGVMT AGMLTLMIPN
MISEISGNPL LHHLGLKDIT AMEGKEVRLG VPASAYWQVM TTIISTGSIN SMHDSSMPLS
GAMQMLGMMT NCFYGGKGVG LLNYFIFLII AVFISGLMVG RTPEFMGRKV EAREMKIAAI
IALFHPFLIL VGTALSAYFA AHHPQMVWSV QPANWFNNPS NHGFSEMLYE YTSSSANNGS
GFEGLADNNI FWNITTGIVM ILGRFIPIIG PVAIAGILAK KKYIPESAGT LQTDTSTFGI
MTYAVIMIVA ALAFFPALTL GPIAEYFQSY