Gene Cpin_3476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3476 
Symbol 
ID8359642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4341222 
End bp4341779 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content45% 
IMG OID644965649 
Productmetal dependent phosphohydrolase 
Protein accessionYP_003123144 
Protein GI256422491 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA CGATCTCGAT TGATGACCTG CAGAATATAT GGGAAAAGGT AACCCTCCTA 
CATGGCGGAC AAACATACGG CGGGCATGAG AAAGACCTGA AAATTGAATA CATCAATCAC
ATTGGCAGCG TTGTATTTGA AGTCTTTTAT GCACTGCAGG CAACAGATAA CTTTGACGGC
GAACTGGCCA TTACCTGTGC CCTTTTACAC GATACAGTCG AAGATACCGC CTTCACAAAG
GAAGAACTAA GCTTACTGTA TGGCCAGCGT ATAGCTGACG GCGTACTTGC CTTAACCAAA
AACAGTAGCT TACCCAAAGA AGAACAGATG CCAGACAGTC TGCAACGCAT CCTGCAACAA
CCGAAGGAAG TATGGGCCGT TAAGATGGCG GACAGGATCT GTAACTTGTA CAAACCACCT
CACTACTGGG ATAATGAGAA GAAAATGAAT TACCTGAAAG AAGCCCGCGA AATACACAAC
CAACTGCATA GCGCGAACGT ATACCTGGCC AACAGACTTC TGCGTAAAAT CGAACAGTAT
AAAAAGTATC TCTCATAA
 
Protein sequence
MKKTISIDDL QNIWEKVTLL HGGQTYGGHE KDLKIEYINH IGSVVFEVFY ALQATDNFDG 
ELAITCALLH DTVEDTAFTK EELSLLYGQR IADGVLALTK NSSLPKEEQM PDSLQRILQQ
PKEVWAVKMA DRICNLYKPP HYWDNEKKMN YLKEAREIHN QLHSANVYLA NRLLRKIEQY
KKYLS