Gene Cpin_3459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3459 
Symbol 
ID8359625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4314828 
End bp4315586 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content49% 
IMG OID644965632 
Producthypothetical protein 
Protein accessionYP_003123127 
Protein GI256422474 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0233834 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAC AATTATTGAG AAATGCTTCA CTGGTACTGA CTGTCCGGGA AAAGACCCTC 
CTGGTGGATC CGTATTTAGC GCCTAAAGGA ACGTATGCAG CATTTGACTT TACCGGCAAT
GAGCGCCGAA ATCCACTGGT AGACCTTCCA TTGAGTGAAC AGCAATTAGC TGCGCTCATT
GCACATACAG ACGCCGTTTT ACTGACGCAT ATCCATTCGG ATCACTGGGA TGATACCGCG
CGTGAATTCA TCCCTAAACA CATACCGGTA TTATGTCAGC CTGCAAATGA AGACACTATC
CGGGAACAGG GTTATACTAA CGTAACCCCT GTTGCAGATG AACTGATATG GGAAGGCATA
AAGATCAGCC GTACACATGG TCAGCATGGT ACCGGGCAGA TAGGTGAGCG CATGGGAATC
GTATCCGGCT ATGTGATCAG CGATGGCGAA GAAGAGCTTT ACATCGCCGG AGATACCATC
TGGTGCGACG ATGTAAAGCA GGCACTGGAT AAATATAAAC CTAAGAAGAT CATTGTCAAT
GGTGGCGGCG CCCGCTTTGT AGAAGGAGAC GCAATCGTGA TGGATATTCG GGATATCTTA
CAGGTATGCA ATTACGCACC TGGTGCCAGT GTATCGGTGG TACACCTGGA AGCGGTCAAT
CATGGGAAGC AATCCCGTGA GGAGATCAGG AAAGCCCTGC AGGAACAACA GTTCACACAC
AGGTGTTTCG TGCCGGAGGA TGGTGCATTC CTTTTCTAA
 
Protein sequence
MKVQLLRNAS LVLTVREKTL LVDPYLAPKG TYAAFDFTGN ERRNPLVDLP LSEQQLAALI 
AHTDAVLLTH IHSDHWDDTA REFIPKHIPV LCQPANEDTI REQGYTNVTP VADELIWEGI
KISRTHGQHG TGQIGERMGI VSGYVISDGE EELYIAGDTI WCDDVKQALD KYKPKKIIVN
GGGARFVEGD AIVMDIRDIL QVCNYAPGAS VSVVHLEAVN HGKQSREEIR KALQEQQFTH
RCFVPEDGAF LF