Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3459 |
Symbol | |
ID | 8359625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4314828 |
End bp | 4315586 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644965632 |
Product | hypothetical protein |
Protein accession | YP_003123127 |
Protein GI | 256422474 |
COG category | [R] General function prediction only |
COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0233834 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTAC AATTATTGAG AAATGCTTCA CTGGTACTGA CTGTCCGGGA AAAGACCCTC CTGGTGGATC CGTATTTAGC GCCTAAAGGA ACGTATGCAG CATTTGACTT TACCGGCAAT GAGCGCCGAA ATCCACTGGT AGACCTTCCA TTGAGTGAAC AGCAATTAGC TGCGCTCATT GCACATACAG ACGCCGTTTT ACTGACGCAT ATCCATTCGG ATCACTGGGA TGATACCGCG CGTGAATTCA TCCCTAAACA CATACCGGTA TTATGTCAGC CTGCAAATGA AGACACTATC CGGGAACAGG GTTATACTAA CGTAACCCCT GTTGCAGATG AACTGATATG GGAAGGCATA AAGATCAGCC GTACACATGG TCAGCATGGT ACCGGGCAGA TAGGTGAGCG CATGGGAATC GTATCCGGCT ATGTGATCAG CGATGGCGAA GAAGAGCTTT ACATCGCCGG AGATACCATC TGGTGCGACG ATGTAAAGCA GGCACTGGAT AAATATAAAC CTAAGAAGAT CATTGTCAAT GGTGGCGGCG CCCGCTTTGT AGAAGGAGAC GCAATCGTGA TGGATATTCG GGATATCTTA CAGGTATGCA ATTACGCACC TGGTGCCAGT GTATCGGTGG TACACCTGGA AGCGGTCAAT CATGGGAAGC AATCCCGTGA GGAGATCAGG AAAGCCCTGC AGGAACAACA GTTCACACAC AGGTGTTTCG TGCCGGAGGA TGGTGCATTC CTTTTCTAA
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Protein sequence | MKVQLLRNAS LVLTVREKTL LVDPYLAPKG TYAAFDFTGN ERRNPLVDLP LSEQQLAALI AHTDAVLLTH IHSDHWDDTA REFIPKHIPV LCQPANEDTI REQGYTNVTP VADELIWEGI KISRTHGQHG TGQIGERMGI VSGYVISDGE EELYIAGDTI WCDDVKQALD KYKPKKIIVN GGGARFVEGD AIVMDIRDIL QVCNYAPGAS VSVVHLEAVN HGKQSREEIR KALQEQQFTH RCFVPEDGAF LF
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