Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3450 |
Symbol | |
ID | 8359616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4305005 |
End bp | 4308211 |
Gene Length | 3207 bp |
Protein Length | 1068 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644965623 |
Product | hypothetical protein |
Protein accession | YP_003123118 |
Protein GI | 256422465 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0554556 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCTTT TTCTGCAAAG AATGATAAAG AATTTTGTCA TTCACACAAC CTTTATTGCC AGCACATTTC TTCTTCTTTT TGTCCTGACT AATGCCAGCA ACAGTTATGC GCAGTCCACA GACGCTTCCA TCTCCGGTAA AATAACCGGT ACAGACGGAA AGGGACTCTC CGGCGTTTCT GTTACCGTAC GCAACGAATC GACCGGTTTT CAGTCTGTTT CCATTACAAA CAAAGAAGGT AAATACTCCT TCATCCAGTT ACCCCTTGGT AAGCCGTACA CCGTAAAAGC GGCCTTCGTC GGTTTTGCCA CACAGATCAA AAACCAGTTG AGCGTTAACC AGGGCGATAA CCTCATCATA GATTTTACCA TGAGCGAATC CGTGAGCAAA CTAAAAGAGA TCATCGTCAA CGCCAATACA CTCAACAAAA GAATAGACCG ATTGGGGTCC AGTACCGCAG TCACCGCACA GAACATCCAG CAGTTGCCGG CGCAGAACAG GAACTTCAAT AACCTGTCCG CACTGGCACC TACTACGAAT GGTACCAATA TCAGCGGACA ACGTGCTTCT TCGACCAACT TCCTGATTGA TGGCGCCAGC GCCAGAAACA ACCTGACTTC CGGTGCGCTG GGTAGTGGTC CTTATTCTCT GTCACTCGAA GCGATCCGTG AGTTTGAAGT GATTACCAAC GTATATGATG TGACACAGGG CCGTCAGGGT GGTGGCGCTG TAAGCGTGGT AACAAAATCA GGTACCAATA CACTGACCGG TAGCGTATTC GACTACTATC GTTCTGACTT TCTTGCCAGT CCTTATGACA TCAGAGGTAA CAAACGTCAG CAGCAGTTCA CCACCAACCA GTATGGCTTC AGCCTGGGTG GCCCCATCAT CAAAGACAAA CTGCATTTCT TTACCGCACT GGACAGACAG GATGAAAAAC AGCCCTTCTA CATTGCCGAC CTGAAAGATG ATAATGACAT CATCGCTAAC CGTATCAGCA GGGGTGCTCT GGATACTGTG CTGAATATTG CCCGTACTAA ATATGGTCTG AGTAATAATC CGCAGGTAGG AGAATTCCAG CGTAAAACAC TGGCGAATAC CTTCTTTGTA CGCCTCGACT GGCAGATCAA TGCAAAAAAC CGCCTGACCA TCCGTAACAA CTACAGCGAC TGGAAAAACC CAAACAGCAA CAGCGATAAC TCTAACATCA ACCTGTTTGA AGTATGGGGT AATTTCAAGT CGAGAGAAAA TAGTACACTG GCGTCTTTAC GTACCCAGTT TACGCCTACC TTCCTGAACG AACTGAAAGT ACAGTATCAG ACGGCTACGC GTAATTATTA TCCGAACAGC GAACTGCCTG CTGCTAATAT CCCACGTGCG ATTGTAACCG TTCGTTCCTT ACTGCCGAAT GGTACTATGG GTAACACCAC CGTACAGCTG GGCGGACAAC GTTTCTTTCC GGAAAGCAAC CTGGAAAACC AGATACAGCT CGTGAACACC TCTTATCTGA CCAAAGGAAA ATACCGTTTT ACCTTCGGTA CAGATAACAC CCTGACCTAC CTGGATACTT ATATTTCCAG CGAACAGAAC GGCCGTTTTA TCTTTAACAG TCTGCAGGAA TTTGCGGATA TGAATCCATC CCGTTACGCC AGAGAAGTAC CTTTAAAAGG TATTCCTTCC GTACAGCAAT GGATACTGAA TGCCTCTCTC TTCGGACAGA TGCAATTTGA GCCGGTAAAG AACGTAGAAG CCCTCATTGG TGTAAGATGG GACCTGACCA GCTACCTGAG CCAGGCAGAT TATAACCCGG CTGTGGAGAA AGCGTTCGGC CTACGTACTG ACAGCAAAAT TACTGATGCC GGTAAGATCC AGCCCCGTTT GCAGTTAACC TGGGATATCA AGGGTAACAA AACCGATATC GTGCGTGTAG GTGCAGGTTT GTTCTCCGCT TATCCGGTGA ACTATGCACA GGTAAACAAT ATCCAGAACA GCGGTACCAT GGTGGCCTCT ATCGATGTAT CCCGTCCTGC CACTGGCACC AGCCTGGTTC CCGTACCGGA TTTCGTTTCT TACAGGAAAG ATCCTTCTAC CGCTCCTGGT CTGATCAATG GTGTGCCAAC TGTATCTACC ATCAACCTGA ACGATCCGAA CCTGAAAATG CCCTCTATTT TCAAAAGCAA TATCAGCTAT AATAAGATCT TCGGCGACTG GCTGCGTGTA GGTGTAAACT TCCTTTACTC GCATACCAGC AACAACTATG TATACCTGGA TCAGAACATA GTAGATCAGC CTTATTTCCG TCTGGCCAAT GAGAACAACA GGGCCGTATT CGTTCCGGCG AGCACGATCA CTGCCAACGG TACTACCAAC AACGTACTGG GCAGAAAAAC ACAGGATGTA GGCAGAACAC TGATGCTGAC CAATGGCGCT AAACTGAGAC AGGCTGCTGT GATTGTTGAT GCGAGTCTGC GTTACTTCAA AGATGGTTAT TTCAACGTGA GCTATACCTG GAACGATGCA AAAGACAACT CCTCCTACAA TGGTAACGTG GCCAATACCT CTACTTTCAG AGCAGTAAAA TCTGATCCGA GAGACCTGAC TGAAATGAAC TATTCCGATA ACCAGTTCAG ACACAAAATC GTACTGTACG GTGCGACACC AAACTGGAAA GGATTTGTAT TTGCCGGTAC CTTCAGAGGA TTGTCCGGTA CCCGCTTTTC TATGACAGTA GATGCAGATA TCAACGGCGA CTTCGTAGGT GGTCCTGGTA CAGACAATGA CCTGGCCTTT GTATTCGATC CGAATAACCA CAATACACCG GCGGATGTGA AAGCTTCTAT GGAGAAAGTG CTGAGTAACC CGGAAAACCG TGCAAAGAAA TATATCACCC AGAGCCTGGG CAGGATAGCT GACCGTAACG GTGGATCTAA TCCTTTCTCC GGTACTTTTG ACGTAAGACT GCAGAAAACT TTCAAAACAT TTAAAACACA GGGCTTGACC TTTAGTGTTG ATGTGTTTAA CTTCGCTAAC CTCCTGAATA AAAACTGGGG TGTTAACTAC AACCTGGGCG ATCAGAGCCT TTTATTCGTA ACAGGATTTG ATCAGGCTAC CAAAGAATAC AAATACCGTG TAAACGAGAA TGTGGGCGTT ACGACAAAGA ATGGTACGCC ATACCAGGTA CAGCTGGGCG CCCGCTATTC ATTCTAA
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Protein sequence | MHLFLQRMIK NFVIHTTFIA STFLLLFVLT NASNSYAQST DASISGKITG TDGKGLSGVS VTVRNESTGF QSVSITNKEG KYSFIQLPLG KPYTVKAAFV GFATQIKNQL SVNQGDNLII DFTMSESVSK LKEIIVNANT LNKRIDRLGS STAVTAQNIQ QLPAQNRNFN NLSALAPTTN GTNISGQRAS STNFLIDGAS ARNNLTSGAL GSGPYSLSLE AIREFEVITN VYDVTQGRQG GGAVSVVTKS GTNTLTGSVF DYYRSDFLAS PYDIRGNKRQ QQFTTNQYGF SLGGPIIKDK LHFFTALDRQ DEKQPFYIAD LKDDNDIIAN RISRGALDTV LNIARTKYGL SNNPQVGEFQ RKTLANTFFV RLDWQINAKN RLTIRNNYSD WKNPNSNSDN SNINLFEVWG NFKSRENSTL ASLRTQFTPT FLNELKVQYQ TATRNYYPNS ELPAANIPRA IVTVRSLLPN GTMGNTTVQL GGQRFFPESN LENQIQLVNT SYLTKGKYRF TFGTDNTLTY LDTYISSEQN GRFIFNSLQE FADMNPSRYA REVPLKGIPS VQQWILNASL FGQMQFEPVK NVEALIGVRW DLTSYLSQAD YNPAVEKAFG LRTDSKITDA GKIQPRLQLT WDIKGNKTDI VRVGAGLFSA YPVNYAQVNN IQNSGTMVAS IDVSRPATGT SLVPVPDFVS YRKDPSTAPG LINGVPTVST INLNDPNLKM PSIFKSNISY NKIFGDWLRV GVNFLYSHTS NNYVYLDQNI VDQPYFRLAN ENNRAVFVPA STITANGTTN NVLGRKTQDV GRTLMLTNGA KLRQAAVIVD ASLRYFKDGY FNVSYTWNDA KDNSSYNGNV ANTSTFRAVK SDPRDLTEMN YSDNQFRHKI VLYGATPNWK GFVFAGTFRG LSGTRFSMTV DADINGDFVG GPGTDNDLAF VFDPNNHNTP ADVKASMEKV LSNPENRAKK YITQSLGRIA DRNGGSNPFS GTFDVRLQKT FKTFKTQGLT FSVDVFNFAN LLNKNWGVNY NLGDQSLLFV TGFDQATKEY KYRVNENVGV TTKNGTPYQV QLGARYSF
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