| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3444 |
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| Symbol | |
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| ID | 8359610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4295862 |
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| End bp | 4297385 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644965617 |
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| Product | NCS1 nucleoside transporter family |
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| Protein accession | YP_003123112 |
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| Protein GI | 256422459 |
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| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000477865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0865773 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACC ACGAAGACAT CAGCCAAAAT GTATCCCGCT CTGCACTCTA CAGTGAAGAC
CTGGCACCGG TACCCGCTTC CGCAAGGACC TGGAATACCT GGAACTATGC CAGCCTCTGG
ATCAGCATGA GCCTGTGTAT CCCTACCTAT ATGCTGGCCA GTTCACTCAT TGAAGGTGGT
ATGAACTGGT GGCAGGCCAT CCTCACCATC TTTGCCGGTA ATACGGTTGT ACTGATCCCT
ATGATCCTGA ACGGACACGC CGGCGCTAAA TACGGTATTC CTTTTCCCGT ATTTGCCAGG
GCAAGTTTTG GTACCAAAGG CGCTAATATA CCCGCCATGT TACGGGCCAT CGTCGCCTGC
GGATGGTTTG GTATCCAGAC CTGGATCGGC GGTTTTGCCC TGTACCAGAT GTTACAATTA
TGGATACCCG CGCTGGCGAC AATGCCCGCC ATATTTCCGG CTTCCTTCGG ATTGGCAACT
GGTCCGGCCA TCTGTTTCCT GCTTTTCTGG CTGCTGAACA TGTATATCGT ATACCTGGGC
ATCGACAGTA TCCGCAAATT ACTGGTCTTT AAAGCTATTT TTCTGCCGGT AGCCGTACTG
GCCCTCCTGT TCTGGGCAAT TAACGCTGTA GAAGGCGGAT TAGGCCCTAT TCTGACACAA
CCTTCCCGCT TTACCTCAGA TGCCGCTTTC TGGGCATTCT TCGTACCCGG ACTGACAGGT
ATGGTCGGCT TCTGGGCGAC ACTGTCCCTG AATATTCCTG ACTTCACCCG GTATGCCGTC
AATCAACGGG CACAGATCAA AGGACAGGCT TTGGGATTAC CTCCTTCCAT GACCCTGTTT
TCTTTCATTG GGGTAGTCGT GACTTCTGCC ACTACCATCG TATACGGGAC TACCATCTGG
GATCCGGTTG TACTCGCCGG TAAGTTTGAA AATAAAATAC TGGTAAGCAT CGCGATGATC
GCAGTGGCTA TTTCCACGCT GGCGACTAAC ATCGCCGCGA ATATTATCAG TCCGGCGAAT
GACTTCGCCA ACCTCGCTCC GCAGAAAATC AACTTCCGCA CAGGCGGTTA TATCACCGGT
ATCATCGGCA TACTTATTTT CCCCTGGAAA TTAGTCGCTG ATCCTACCGG GTACATCTTT
ACCTGGCTGG TGGGTTATTC CAGCTTATTG GGCCCCGTAG GGGGCATTAT GATCGCCGAT
TATTACCTGG TGAGAAAACA ACAACTACAG ATGACTGCAC TATACGATCC GAAAGGACAA
TATAGTTTTA CCAATGGTTT TAACCGCTAT GCCATGCTGG CCCTGATATT GGGCATCGTC
CCCAATATCC CCGGTTTTCT TACCACCATC AAACTTATTC CACCGGATGC AGTACCGGCC
TGGATCACAC ACTTATACAG CTATGCATGG TTTGTAGGTT TCTTTGTGTC AGGCATCAGC
TATTACCTCA TCATGCGTTC TTATAGTATC ATTACCACTA CCGGAACCAA TAAACAGGGA
GTCAATTATG TCACTGCTGA TTAA
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| Protein sequence | MTDHEDISQN VSRSALYSED LAPVPASART WNTWNYASLW ISMSLCIPTY MLASSLIEGG
MNWWQAILTI FAGNTVVLIP MILNGHAGAK YGIPFPVFAR ASFGTKGANI PAMLRAIVAC
GWFGIQTWIG GFALYQMLQL WIPALATMPA IFPASFGLAT GPAICFLLFW LLNMYIVYLG
IDSIRKLLVF KAIFLPVAVL ALLFWAINAV EGGLGPILTQ PSRFTSDAAF WAFFVPGLTG
MVGFWATLSL NIPDFTRYAV NQRAQIKGQA LGLPPSMTLF SFIGVVVTSA TTIVYGTTIW
DPVVLAGKFE NKILVSIAMI AVAISTLATN IAANIISPAN DFANLAPQKI NFRTGGYITG
IIGILIFPWK LVADPTGYIF TWLVGYSSLL GPVGGIMIAD YYLVRKQQLQ MTALYDPKGQ
YSFTNGFNRY AMLALILGIV PNIPGFLTTI KLIPPDAVPA WITHLYSYAW FVGFFVSGIS
YYLIMRSYSI ITTTGTNKQG VNYVTAD
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