| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3442 |
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| Symbol | |
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| ID | 8359608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4292976 |
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| End bp | 4294433 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644965615 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_003123110 |
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| Protein GI | 256422457 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000938432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.12145 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGTACG AACGGGTCAG GAACTTTGTT AATGGAAGTT TTAAAGAAGT ATCATCTCAA
CGGACGTTGC CTGTAATATC ACCAACAGAC GGTTCCTTGT TAGCTGAAAT GCCATGCTCC
ACCGCCGCCG ATCTGGAAGA AGCCGTACAG GCAGCCAAAG CTGCATTTCC GGGCTGGAGT
AAGACGCCTA TCAAGGAAAG AGTACAGGTA TTCTTTCGTT ATAAATATCT GCTGGAACAA
CACCTGCAGG GACTGGCCGC ACTGGTCAGT GAAGAAAACG GCAAAACCAT GAGTGAAGCC
GTGGCTGAAG TAGAAAAGTG TATCGAACTG ACAGAATTTG CGACTTCTTT ACCGCAACTG
ATCGCGGGTG AAGTACTGGA AGTAAGTGCC GGTGTGGAGT GCAGAACTTC ACATGTACCA
TTAGGTATAG TCGCCTCGAT CGTACCCTTC AATTTCCCTG CGATGGTGCC TAACTGGACC
ATCCCGAATG CCATCGCCCT GGGCAATTGC CTGATAATGA AACCATCGGA AAAAGTACCG
CTCAGTCTGG GGATCATTGC CCGTTTACTG AAAGAAGCAG GTCTCCCGAA TGGTGTATTG
AATATTGTCA ATGGCGACAG CGAAATTGTC AATGCCATCT GTGATCATCC GGATATAGCA
GCAGTCTCTT TTGTAGGCTC TACAAAGATT GCCAGGATAG TATATCAGCG TGCCACACAG
CACCTGAAAC GTTGCCTTGC CTTGGGCGGC GCCAAAAATC ACTTACTGGT ATTACCGGAT
GCGAAACCTG GTATGACCGC ACAGAACGTG GCCGCTTCTA TGAGCGGTTG CGCCGGACAG
CGTTGTATGG CCGCATCTGC CATGATCGGG GTCGGCGCCG TGGATCATAT CGTTGATCTC
GTATGCGAAG AAGCAAGAAA GATCGTACCC GGACAAAACC TGGGTGCCGT CATCAGTAAA
GAATCAAAGG AAAGGATCGA AAAATATATT ACTGAAGCCG AAGCACAAGG CGCCCGTATT
CTTGTAGACG GTCGGGGTGT GCAGGTAGCA GGTAAAGAAA ACGGTACTTA TGTTGGCCCT
ACCGTGATCG ATTATGTAAC CGCTGATATG GCGGTCGCTC AGGAAGAAAT CTTCGGACCT
GTTATCAGTA TCATGCGTAC CGAAACCGTA GATGAAGCGC TCCGCATTGA AAATGCCAAC
CCCTACGGCA ATGCGGCTTC GGTTTTTACA CAGAACGGAG GGATGGCCCG CTATATAGCA
GAAAGGGCCA GCGCCGGTAT GATCGGTGTA AATGTAGGTG TGCCCGTTCC CCGCGAACCA
TTCTCTTTTG GCGGATGGAA TGAAAGTAAG TTCGGCGTTG GTGATATCAC CGGAAAAAGC
TCCATAGAAT TCTGGACCAG GTTGAAGAAA AGTACGACCA AATGGAACCC TGAAGAAGGC
GTTAACTGGA TGAGTTAA
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| Protein sequence | MKYERVRNFV NGSFKEVSSQ RTLPVISPTD GSLLAEMPCS TAADLEEAVQ AAKAAFPGWS
KTPIKERVQV FFRYKYLLEQ HLQGLAALVS EENGKTMSEA VAEVEKCIEL TEFATSLPQL
IAGEVLEVSA GVECRTSHVP LGIVASIVPF NFPAMVPNWT IPNAIALGNC LIMKPSEKVP
LSLGIIARLL KEAGLPNGVL NIVNGDSEIV NAICDHPDIA AVSFVGSTKI ARIVYQRATQ
HLKRCLALGG AKNHLLVLPD AKPGMTAQNV AASMSGCAGQ RCMAASAMIG VGAVDHIVDL
VCEEARKIVP GQNLGAVISK ESKERIEKYI TEAEAQGARI LVDGRGVQVA GKENGTYVGP
TVIDYVTADM AVAQEEIFGP VISIMRTETV DEALRIENAN PYGNAASVFT QNGGMARYIA
ERASAGMIGV NVGVPVPREP FSFGGWNESK FGVGDITGKS SIEFWTRLKK STTKWNPEEG
VNWMS
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