| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3435 |
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| Symbol | |
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| ID | 8359601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4280620 |
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| End bp | 4282851 |
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| Gene Length | 2232 bp |
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| Protein Length | 743 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644965608 |
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| Product | hypothetical protein |
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| Protein accession | YP_003123103 |
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| Protein GI | 256422450 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000331011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.56505 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACGAA GATTAATCAT CGTCAGTGTG TTCCTTTTAT CCTCAATCAT CGCCAGCGCA
CAGATTGCCT TTTATGATGC TGAAAAACTA GTACCTTTTG CAAAGATCAG TACACTGGAT
GTTGACCAGA CTAAGGCAGT AGCCGCCATA CTAGCGAACT ATATGCCAAA AGGTACCCCG
AATGACGCTG TAGCTATCAT TGCTGCGTTT AAAGCAAATA ATGGATTTGC AAAGGGACTA
TTTAATACCT CGGTCACAAG AGGAGATAAG GCCGTCTCGA TGCCAGAGTC TGTAGGTGGT
GACTTGATGA GTGCTATCGG AGGTATTGAC GTAACTAAAT TTGCTACCGG CTTAGCTGAA
TTCATGATCA ATCGCAGTAA ACAGGAATTG ACAATTGCTT TCTTCGACAG ATTCAAAGAA
TTTGGAAAGA AAAACCCCGA GTTTGGAGCG CTTTTCCCAA TAACCTACAA TAATCTCAGT
AATCTCCTCG CTTATCAGTA TCCGGAAATG TTACCTGCCC TGCGTTCCGG ATTTTTCGAG
GATATTAAAG CATTGACCTA TCACCTGGAT GACCTGCTGG CATTGCCGAA GTACCAGGCC
CTGTTGAAGG ACTTGCCGGA AGTCGCCGTC GTAGTCAGAT ACATTGCACT CATGCATGAT
ATGGAGTCCG GTGCTAAAGG TGCAGCAACT GTACTGGAAA ACATTGCTGC TTTTCCGGAA
TGGGATCAGA TTAAGAATAG TAATAAATCT GCAGGATGTA AAAATTTCGG CGCTGCATTG
ACGCTCGCCA ATGTTTTTTC CGGTAGTTTA CGGGCGAAAC AAACACCCGA AGACACTACA
AGTGCCTGGG TTACCGAAAA AGAAGTGAAT GCCATGCTCG AAGACGAAAC CAGATTTAAG
ATTTATCTGG CATTAGTACT ACAGGATACA CGTAAAAAGG ATGTTGTCTT TTTTAATGGA
AGTGATCGGA TGCCTTTCGC AGACATGATG AATAAACAGA GTGACAACGC GATCATTCTC
TATACCCAGG TGAAGGAGTT TATTACATTG GCCAAAAAAG TAGACGTCGC TTTTGCTGAT
TTCAAACGGA AGGAAAGTGA AAAGGTGAAA ATAACTAACG AAGACCATAG TAATTACATC
AGCGTCGCAA TAGATGTAAT GGATTATAGC CTCGGCATTG CCAAGCTATT TGATGATCGT
ATTCCGGTTG ACAGCTACAC TAAAATTGCC ACATCTGTCA ATAATTTATA TAAAAGCATT
TACACCAAAC AGTATAGCCA GGCAATGTCA AACGCTATTA CAGTCCTGGA AGAAATACCT
GGTCTGATAG GAACCGCTGA AAGCGATCGT CAGCTGCGGA TGACGGATTC ACTGCTGACC
GTTTTAGGCG CTGCAAAGAA GATTGACAGG AATGAGATCA GCCAGTTGAA AGAGAAACAC
CTGAATCTTG TGGATAGCCT TATAGAAGTG TACAGGGTAG AAAGGGTCAA CAGGGCAAAG
ACCAGCGTTG CGGGAAGTGC CGAATTGATG ACGATAGACA ATGTGCTGTC ATCGCTGAAA
AGAGTGAAAA CCTTATATGC CTTTAAAAAG AACTATAGCG ACGTGCTGTT TCGCATTGCC
CGTTATGGCA TGTTCATGGC CAATGTTGTA AATGCAACTT CATCAGAAGA AGTGGCGAAG
CTGATCGAAA GCACCGTATT ACCCGTAGGT AGTTCCTCCA TCAAGAAGAA TTCCGCATTC
AATATATCCG TACAGGGATA CCTGGGCGCT TTCCTTCGCC TGGAAAAGGG AAAAGATAAG
ACTGTCGGAG GTGCCTGGAA CGATCAGTTC GGGGTGACTG CTCCAATTGG TATATCCCTT
AATTGGGGAT TGAAGAATAA TTGCGGCAGC CTGGGTATAT TTGCCGCACT GTTTGATATA
GGCGCAATCG TAGACTACCA GCTGAAAAGA GATTCTGTAC CCAGTTCCGG CACCTCAGAT
GAAGCAGTCA TTAAAAAAGA TTATTCCGTA AAACTTGGTC AGATAGTGTC CCCTGGATTA
TATCTTGTCT ATGGCGCATT TAAGAATATC CCGCTTTCCC TGGGTATTGG CGGACAATAC
GGCCCCGGAT TGGGGAAAGT AAACGTGGAT AATACAACGG TTGTAAATAG CCCCAGCTGG
CGGTGGAATG CATTCCTGTG TGTAGATATT CCATTCTTTA CGCTGACAAA CAATAACAGG
TCGAAGAAAT AG
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| Protein sequence | MKRRLIIVSV FLLSSIIASA QIAFYDAEKL VPFAKISTLD VDQTKAVAAI LANYMPKGTP
NDAVAIIAAF KANNGFAKGL FNTSVTRGDK AVSMPESVGG DLMSAIGGID VTKFATGLAE
FMINRSKQEL TIAFFDRFKE FGKKNPEFGA LFPITYNNLS NLLAYQYPEM LPALRSGFFE
DIKALTYHLD DLLALPKYQA LLKDLPEVAV VVRYIALMHD MESGAKGAAT VLENIAAFPE
WDQIKNSNKS AGCKNFGAAL TLANVFSGSL RAKQTPEDTT SAWVTEKEVN AMLEDETRFK
IYLALVLQDT RKKDVVFFNG SDRMPFADMM NKQSDNAIIL YTQVKEFITL AKKVDVAFAD
FKRKESEKVK ITNEDHSNYI SVAIDVMDYS LGIAKLFDDR IPVDSYTKIA TSVNNLYKSI
YTKQYSQAMS NAITVLEEIP GLIGTAESDR QLRMTDSLLT VLGAAKKIDR NEISQLKEKH
LNLVDSLIEV YRVERVNRAK TSVAGSAELM TIDNVLSSLK RVKTLYAFKK NYSDVLFRIA
RYGMFMANVV NATSSEEVAK LIESTVLPVG SSSIKKNSAF NISVQGYLGA FLRLEKGKDK
TVGGAWNDQF GVTAPIGISL NWGLKNNCGS LGIFAALFDI GAIVDYQLKR DSVPSSGTSD
EAVIKKDYSV KLGQIVSPGL YLVYGAFKNI PLSLGIGGQY GPGLGKVNVD NTTVVNSPSW
RWNAFLCVDI PFFTLTNNNR SKK
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