Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3398 |
Symbol | |
ID | 8359564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4167022 |
End bp | 4167546 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644965571 |
Product | NusG antitermination factor |
Protein accession | YP_003123066 |
Protein GI | 256422413 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.191132 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.539584 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAAT TTAACGTTGG TTGGTATCTC CTTTATACAA GACCCCGGCA GGAAGCCAGA GTAGCTAAGG AAATGGCGGA CAAAAACATA CAGATATACC TGCCCTATAC AACAGTAACA AGAAGATGGA CTGACAGGAT CAAAGTACTT GAAGTACCGC TCTTTCCATC CTATGTATTC GTGCACCTCA CCAATATGCA TGAATTCTAC TACGGATCAA ACCTGGAAAG CGCCTGCAGT TATGTACGTT TCGGTAATGA AGTAGCCCGT GTAAGTGATG CGGCTGTTGA TGCTGTAAGG ACGATCGCTA AAGCCGGTAA TAACCTGGAA GTTTCCAGCG AACGTTTTAC CCCTGGTCAG CAGATGATGA TTAAAGAAGG CCCGCTCTGC GGTCTGAACT GCGAAGTGAT ACAATACAAA GGCAAAGATA AAATACTCGT ACGTGTGCAT ATGCTGCAAA GAAGCATTAT GGCAGATATG CCGGCCAGCG TACTGATCCC GTTTCAGGAA GAACAACAAT TATAA
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Protein sequence | MSKFNVGWYL LYTRPRQEAR VAKEMADKNI QIYLPYTTVT RRWTDRIKVL EVPLFPSYVF VHLTNMHEFY YGSNLESACS YVRFGNEVAR VSDAAVDAVR TIAKAGNNLE VSSERFTPGQ QMMIKEGPLC GLNCEVIQYK GKDKILVRVH MLQRSIMADM PASVLIPFQE EQQL
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