Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3386 |
Symbol | |
ID | 8359552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4149957 |
End bp | 4150793 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644965559 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003123054 |
Protein GI | 256422401 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.314719 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.674601 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAAAG TATGGTTTAT AACAGGTAGC GCAAGAGGTT TAGGCAGAAG CCTGACAGCA GCAGTATTAG CAAAAGGTGA TCTCGTGGCA GCAACCGCCA GAAATCCTTC ACAGTTAGAT GAATTCGTTC AGCAATATGG CGATCATATA TTCCCCGTTC AACTGGACGT TACAGATTAT ACACAGGTAC GCAAAGCAGT AGAAAATACC ATTGCGCGTT TCGGCAGGAT AGATGTACTG GTAAATAATG CCGGTTTTGG TATCATTGGG GCAGCAGAAG CATTTACAGA CGAGCAGGTA CGTAGTCAGC TGGAAACAAA TCTGTACGCA CCGATAGAAA TTACAAGAGT TGTGTTACCT TATATGCGTA AACAACGCTC CGGCAGGATA CTGCAGATCA GTTCCATCGG TGGTCGTATC ACCAGCAATG GCCTGACCAT GTACCAGAGC GCTAAATGGG GTCTCTCCGG CTTCGCAGAC GGTCTTGCGA AAGAAGTAGG TGCACTGGGT ATTAAAGTGA CTGCCGTTGA ACCAGGTGGA TTTCGTACCG ACTGGGCAGG CGATTCAATG ACCTACGCAG CAAACGTAGA AGGATATGAA TCTACGATTG GTCAGCGGAC AGAGATCTTC AAAACCGGTA AATTTGTTCC TAAAGGCGAT CCTGAAAAAG CAGCAGCCGT ACTGGTGAAC CTGGCAGATC ATCCGGAACC TCCTGTACAC CTCGTATTAG GTAGTGATGC AACCGGGCTA CTGCAACAGG TGAATGCTGC AAGACAGGCC GAATTTGAAC AATGGTTGTC TGTGAGCGAG TCCACCGATG CAGCCGACAA CAAATAA
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Protein sequence | MQKVWFITGS ARGLGRSLTA AVLAKGDLVA ATARNPSQLD EFVQQYGDHI FPVQLDVTDY TQVRKAVENT IARFGRIDVL VNNAGFGIIG AAEAFTDEQV RSQLETNLYA PIEITRVVLP YMRKQRSGRI LQISSIGGRI TSNGLTMYQS AKWGLSGFAD GLAKEVGALG IKVTAVEPGG FRTDWAGDSM TYAANVEGYE STIGQRTEIF KTGKFVPKGD PEKAAAVLVN LADHPEPPVH LVLGSDATGL LQQVNAARQA EFEQWLSVSE STDAADNK
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