| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3372 |
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| Symbol | |
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| ID | 8359538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4134654 |
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| End bp | 4135664 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644965545 |
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| Product | metalloendopeptidase, glycoprotease family |
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| Protein accession | YP_003123040 |
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| Protein GI | 256422387 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.115677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.185322 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGTAA AAATACTGGC CATAGAGTCA TCGTGCGACG AGACAAGTGC TTCCGTACTG
GCCGATGGAA AGATCCTGTC TAATTTTATT GCCAATCAAA CTATTCATGA GCAATACGGT
GGCGTAGTGC CTGAACTGGC CTCCCGTGCT CACCAGGAAA ATATTGTCCC TGTCGTGGAC
CAGGCCCTGA AAGTGGCGGG TGTACGTAAG GAGGAACTGA ACGCCATTGC CTTTACCCAG
GCGCCGGGTC TGATCGGTTC CCTGCTGGTA GGTAGTTGTT TTGCTAAATC CATGGCGCTG
GCCCTGGACG TTCCGCTGAT AGCTGTACAC CACATGCAGG CGCACGTACT GGCTAATTTC
ATTGGTGAGG ATAAGCCTTC TTTCCCTTTC CTCTGTCTGA CAGTGTCTGG TGGTCATACC
CAGATCGTAC GTTGTGACAG TCCTTTGCAG ATGAAGGTAA TCGGTGAAAC ATTAGACGAT
GCCGCTGGTG AAGCGTTTGA TAAAAGTGCC AAATTACTGG GCCTGCCATA TCCTGGTGGT
CCGCTGATAG ATAAATACGC CCGTGAGGGC AATCCGGACA GGTTCAAATT CCCTGAACCA
CAGATCCCGG GACTGAACTT CAGCTTTAGC GGTCTGAAGA CCTCCATTCT CTACTTCCTC
CAGGAACAGC AACAGAAAGA TCCGCAGTTC GCCGAAAATA ACATGGCGGA TATCTGTGCT
TCTATCCAGC ATCGTATCGT CAGTATCCTG ATGAACAAAC TGGTAAAAGC ATCAAAGGAA
ACGGGTATCA AAGAGATCGG TATAGCAGGT GGCGTGAGCG CTAATTCCGG TTTACGTAAC
GCTTTACAAC AGTATGGTGA AAAGTATGGC TGGAAAACCT ACATACCGAA ATTTGAATAC
TGTACAGATA ATGCTGCGAT GATTGCCATG ACCGCCTGGT ATAAATATCA GGCAGGGGAG
TTTGTAGGAC TGGATGCCGT TCCAGGCGCC AGAGCAGGTT TTGAACATTA G
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| Protein sequence | MSVKILAIES SCDETSASVL ADGKILSNFI ANQTIHEQYG GVVPELASRA HQENIVPVVD
QALKVAGVRK EELNAIAFTQ APGLIGSLLV GSCFAKSMAL ALDVPLIAVH HMQAHVLANF
IGEDKPSFPF LCLTVSGGHT QIVRCDSPLQ MKVIGETLDD AAGEAFDKSA KLLGLPYPGG
PLIDKYAREG NPDRFKFPEP QIPGLNFSFS GLKTSILYFL QEQQQKDPQF AENNMADICA
SIQHRIVSIL MNKLVKASKE TGIKEIGIAG GVSANSGLRN ALQQYGEKYG WKTYIPKFEY
CTDNAAMIAM TAWYKYQAGE FVGLDAVPGA RAGFEH
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