| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3352 |
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| Symbol | |
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| ID | 8359518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4116281 |
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| End bp | 4117528 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644965525 |
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| Product | cysteine desulfurase, SufS subfamily |
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| Protein accession | YP_003123020 |
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| Protein GI | 256422367 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.143815 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACACG TACCAGACAT CACTGTTCCG GCACTAGATG TAGAAAAGAT CAGAAAGGAC
TTCCCGCTGT TACAGGAAAA AGTATACGGC CAACCGCTTG TATATCTTGA TAATGCGGCC
ACTACCCAGA AACCGCAGGT TGTACTGGAT ACGCTGATAG AATACTACAC CCGCATCAAC
AGTAACGTAC ACCGTGGTGT ACACCACCTG AGCCAGGAAG CAACCAATGC TTACGAGAAC
TCCCGTAAAA TCATTGCTTC CTTCATCAAC GCCCGCAAAT CCGAAGAAGT GATCTTTACC
AAAGGTACTA CCGACGGTAT CAACCTGATC GCTTACGCCT TCGGCCGTGG CGAAATCAAA
CCAGGCGACG TGGTACTGAC ATCCGCGATG GAACATCACT CCAATATCGT TCCCTGGCAG
ATGATGTGTG AAGACCGTGG CGCAGAACTG AAAATCATCC CGATGGATGA AAAAGGAGAA
CTGCTCATGG ACGAATTCAG CGCATTGCTG ACCGACAAAG TAAAAATCAT CGCTGTTACA
TACGTTTCCA ACTCCCTCGG CACCGTTAAT CCCATACGCG ACATTATTGC CCAGGCACAT
GCCCGTAACA TTCCTGTTCT GCTCGATGCA GCACAGGCAG TACAGCATAT GCCGGTAGAT
GTGCAGGAGC TGGATGTTGA TTTCCTCGTA TTCTCCGGTC ATAAGATCTA CGGTCCTACC
GGTACCGGTG TACTCTATGG CAAGGAAGAA TGGCTGGACC GCCTCCCGCC TTACCAGGGT
GGTGGAGATA TGATCAAAAC CGTGACCTTC GCTAAAACAA TCTATAATGT ACTGCCTTAC
AAATTTGAAG CAGGTACGCC GGATATCAGC GGAGCGATCG CATTGGGAAC AGCAGTACAA
TATGTACAAC AGATAGGTGT TGAAAATATA CAGGCATGGG AAGAACAACT GGTGGAGTAT
GCCGTACAGC AGCTGCAACA GATTGAAGGC ATCCGCTTTA TCGGTAATCC GAAACACCGT
TCCGGCGCCG TTTCCTTCCT GGTATACGAT ATCCACCCCT ACGATCTCGG CGAACTGCTG
GATAAACAGG GTATCGCTAT CCGTACCGGA CACCATTGCG CTGAACCTGT CATGGATTTC
TTCTGTATTC CAGGCACCGT GCGCGCATCA TTCGCAGTGT ATACTACCTT TGAAGATATA
GACAGATTAG TGGCAGGCAT TAAAAAGGCT GTCTCTATGT TAAGATAA
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| Protein sequence | MQHVPDITVP ALDVEKIRKD FPLLQEKVYG QPLVYLDNAA TTQKPQVVLD TLIEYYTRIN
SNVHRGVHHL SQEATNAYEN SRKIIASFIN ARKSEEVIFT KGTTDGINLI AYAFGRGEIK
PGDVVLTSAM EHHSNIVPWQ MMCEDRGAEL KIIPMDEKGE LLMDEFSALL TDKVKIIAVT
YVSNSLGTVN PIRDIIAQAH ARNIPVLLDA AQAVQHMPVD VQELDVDFLV FSGHKIYGPT
GTGVLYGKEE WLDRLPPYQG GGDMIKTVTF AKTIYNVLPY KFEAGTPDIS GAIALGTAVQ
YVQQIGVENI QAWEEQLVEY AVQQLQQIEG IRFIGNPKHR SGAVSFLVYD IHPYDLGELL
DKQGIAIRTG HHCAEPVMDF FCIPGTVRAS FAVYTTFEDI DRLVAGIKKA VSMLR
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