| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3307 |
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| Symbol | |
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| ID | 8359473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4070331 |
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| End bp | 4072088 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644965480 |
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| Product | ABC transporter related |
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| Protein accession | YP_003122975 |
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| Protein GI | 256422322 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.233866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00000537626 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGAAGA CCAACAAGCC CGTAACCAAG ACGGGCAAAG GAAACTCCGG ATTAATGTCT
CTACTGCGCC CTTACAGAGG CCAGTTATTC CTACTGATGC TGATGGCCCT GTGTAGTAAC
CTGCTGAACC TGGTGCTGCC CTACCTGACG TCCAGAGGAA TCGACGCATA CACCGCCGGC
ACGCTCGATC TGAACCGCCT GGTCGTGGAA TTCATCGGCG CTGCTATCGC TATTTTCATC
TTTACGTATG TGCAGAGTAT CATTCAGACC TATATGTCTG AAAGGGTAGG CCGCCAGTTA
CGTACCGACC TTGCTGCACG TATTTCCCGC CAGGACTACG CCTATATACA GCAGGTCAAT
CCTTCCAAAC TACTGACCAA CCTGACCGGC GACGTCGATA GTATCAAACT GTTTGTATCG
CAGGCCATCA TCTCTATCGC TTCTTCCGTA TTTATGATTA TCGGTTGTTG CGTGTTGCTG
ATCAGCATCG ACTGGAAACT CGGTCTGACC GTTATCTCCG TCGTGCCTTT CATCGCCGTA
GCATTCGGCA CGGTGTTGCG GAAGGTAAGA ACGACCTTCA AAAAGAGCAG GGAAGTGGTC
GACAAACTGA ATAAGACCAT TAACGAGAGT ATTACCGGTG CGGCCCTGGT CCGCGTGATC
AATGCGCAGC AGCAGGAATA TGACCGCTTC ATAGCTCCGA ATGGGGAATC CATGTCCCTG
GGTATTGCGG TAGTCCGCCT TTTTGCAGGA CTAGTACCAG TCATCAGTTT CCTGGGTGGT
ATGGCAACCC TGGCGACCTT AATGCTGGGT GGTCACTTCG TGATCAACGG AGAAATGACC
CTGGGTAATA TCGCCGCCTT CAACAGCTAT ATCGCCATGC TGATCTTCCC GATCATCGTC
ATCGGTTTTA TGAGTAACCT GATCGCACAG GCCACCGCTT CCTATCAACG TATCGCAGAG
GTACTTCATG CACCCGAATC CGAAGAAAAA GGTACTGTGA CAGATACCCT GAAAGGCGAC
CTCCATGTAG ATCATATTGA CCTTTCCCTG GATGGTAAAC CGATCCTGAA AGAGGTCTCT
TTCTCCGTAA AAGCAGGTAC GCGTACTGCG ATTATCGGTC CGACAGCCGC CGGTAAAACA
CAGTTGCTCA ATATTATTGT CGGTCTGCTG AAACCAAACG GGGGGCATAT CAGTTATGAC
AACACGGACC TCTCCGACTA TGATAAAACC GCGCTGTTGC AACAGGTGGG GCTCGTATTC
CAGGATAGTA TCGTGTTTAA TATGAGTCTG CGGGAAAACA TTGCTTTCAA TGAGAACGTA
AGTGAAGACC TGATGAAACA GGCGATAGCT ACCGCAGAAC TGAAAGAGTT TGTGGCCAGT
CTTCCGGACG GACTGGACAC CGTGGTTTCT GAAAGGGGGA ACAGCCTTTC CGGCGGACAA
AAACAGCGTA TCATGCTGGC CAGGGCACTG GCGATCAATC CGCAGATCCT GCTGCTGGAT
GATTTTACCG CCAGGGTAGA TGCGAACACC GAACAACGTA TCCTGGACAA TGTGCAGGAA
AACTATCCGC ACCTGACGCT CATATCTGTG ACACAAAAAA TAGCTTCTGT AGCACATTTT
GACCAGATAA TCCTGCTGAT GGATGGTGAA GTGGTGGCCA CAGGCACACA TCAGGAGCTG
ATGCAGACAT GTCCCGAATA CGTACAGATC TTTAATTCCC AACGTAGTAC CAGCAATTAT
GAATTACAAC CTGAATAA
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| Protein sequence | MKKTNKPVTK TGKGNSGLMS LLRPYRGQLF LLMLMALCSN LLNLVLPYLT SRGIDAYTAG
TLDLNRLVVE FIGAAIAIFI FTYVQSIIQT YMSERVGRQL RTDLAARISR QDYAYIQQVN
PSKLLTNLTG DVDSIKLFVS QAIISIASSV FMIIGCCVLL ISIDWKLGLT VISVVPFIAV
AFGTVLRKVR TTFKKSREVV DKLNKTINES ITGAALVRVI NAQQQEYDRF IAPNGESMSL
GIAVVRLFAG LVPVISFLGG MATLATLMLG GHFVINGEMT LGNIAAFNSY IAMLIFPIIV
IGFMSNLIAQ ATASYQRIAE VLHAPESEEK GTVTDTLKGD LHVDHIDLSL DGKPILKEVS
FSVKAGTRTA IIGPTAAGKT QLLNIIVGLL KPNGGHISYD NTDLSDYDKT ALLQQVGLVF
QDSIVFNMSL RENIAFNENV SEDLMKQAIA TAELKEFVAS LPDGLDTVVS ERGNSLSGGQ
KQRIMLARAL AINPQILLLD DFTARVDANT EQRILDNVQE NYPHLTLISV TQKIASVAHF
DQIILLMDGE VVATGTHQEL MQTCPEYVQI FNSQRSTSNY ELQPE
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