Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3305 |
Symbol | |
ID | 8359471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4069140 |
End bp | 4069955 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644965478 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003122973 |
Protein GI | 256422320 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00000908006 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATACTTA TCGAGACCTA TATTCCGACA CAGCTGACCC ATCTGATCAA AACCTGCTGG TACCTTGAGG TACCAGCTAA GCTGCCACAT CCTTACCAGG AAGACATATT GCCCGACGGG CACCATGAAA TCATTTTTCA CCTGCCTCCG CATACAGGTA AACGTCGTTT TAAAGCAGGA GAATGGCTCG AAGAGCCTGC TGCTTTTATC GCAGGACAGA CGCTGACCAG CTATACTTTA GCCCTGATGC CCGGCGCACG CCTGTATGGT ATCCGCTTCT ATCCACATAC ATTGTCTGCC TTTCTGAAAA TGCCTGTACC AGATACCGAA ACAGGTATCA CACCTTTGAG CGATATCGTG CCGGAAGCAC CTTTTTGGGC GTGTATAGCA GCAGATCCGC AGCAGACTTT CAGACAGTTT GAACGTTTGC TGACAAGCAG CATCAGCAAA CTGGAGCCGC CATCCGGCGC TTATGACTAT GTACATGCAG CGGTCGCCGC TATTCTGCAA AACAAAGGGA ATATTTCGGT GGACAGGCTG ATACAACGTA CCGGCGTTTC GGCCAAACAC CTGGATGTCC TGTTCAAACG ACAGGTAGGA CTGACACCCA AGGCAATCAG CAATATTATC CGCTTTAATC ATTTTATTGC CTGGAAAAAC CGGCATCCGG AGCAGAATTA TACCGCCAGT GGTTATGAGA CAGGCTTTTA TGACCAGTCT CACCTCATTC GCAGCTTCCA TCAGTATACA CAACAATCGC CCAAAGCCTG GTTCAATAAC AATACCGGCA TCAATGACGT ATTCGTGAAC ATCTGA
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Protein sequence | MILIETYIPT QLTHLIKTCW YLEVPAKLPH PYQEDILPDG HHEIIFHLPP HTGKRRFKAG EWLEEPAAFI AGQTLTSYTL ALMPGARLYG IRFYPHTLSA FLKMPVPDTE TGITPLSDIV PEAPFWACIA ADPQQTFRQF ERLLTSSISK LEPPSGAYDY VHAAVAAILQ NKGNISVDRL IQRTGVSAKH LDVLFKRQVG LTPKAISNII RFNHFIAWKN RHPEQNYTAS GYETGFYDQS HLIRSFHQYT QQSPKAWFNN NTGINDVFVN I
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