Gene Cpin_3293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3293 
Symbol 
ID8359459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4057044 
End bp4058312 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content52% 
IMG OID644965466 
Productamine oxidase 
Protein accessionYP_003122961 
Protein GI256422308 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1231] Monoamine oxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0007527 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000210093 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCACAT CAGAAGAAAT TATCATTATA GGGGCTGGCG CCGCCGGCCT CCTTGCAGCC 
AGGGAATTAT CTGCACATCA TAGCGTTACC GTGCTGGAAG CCCGGGATAT GATCGGAGGA
AGGATACAGA CCGTTTACCG GGATGGTGTC AAATCCGCCG AAACCGGCGC TGAATTCGTA
CACGGTGAGT TACCCATCAC ACTCGGTCTG CTGAAAGAAG CAGGACTCTC CTACTATCAC
ATTTACGGAA AAATGTTCCA GGTGCGGGAC GGTAAATGGG ATGCCCGTTA CGAAATGATC
GAGGATTGGG ACGGACTGCT GGAAAAAATG AGCAGCATCC CGACAGATAC GACCATGCAG
GCGTTCCTGG ATGAACAATA TCCCGTGGAA CAGTATGTCA GTCTGCACGA AAGCGTGAAG
TCCTTCGTAC AGGGTTACGA CCTCGCCGAT ATGACCAGGG TGAGCGTAAA AGCCCTTTAC
AGTGAATGGA CAAACGAAAG TGAGAATAAC TTCAGGATCG ACCAGGGTTA TACCGCCATG
GTCCGTTACC TGGAAGACGT TTGCCTCCGT CAACAGGCCC GTATTGTTAC CAGTGCAGTA
GTACGCCATA TTGAGTGGTC AGCTGGTAAG GTAACCGTCA CCACGGAGGC AGGCGCCACC
TATACTGCCC ACAAAGTGAT CATCGCTGTT CCCTTAGGCA TCCTGCAACA AGGCCATATC
CACTTCTCTC CTGCCCTCCC CGATCAGATG GCAGCAGCCA ACAATATTGG CTGGGGTACG
GTGATCAAAA CAGTCCTGGA ATTTAAGGAA CCCTTCTGGG AAAAACAGGC ACCACAAGTG
GGCTTTGTAC TGGGAAAGGC GCCCATTCCT ACCTGGTGGA CGCAACTGCC GGATAAAGCC
AATGTGCTTA CCGGCTGGCT GGGCGGACCA CCCGCTTTTC CGCATCTCCA CAAAACAGAC
GACGAATTGC TGGAAATGGC GCTACAATCG CTGGCCATTC TTTGTAATGA AGACGCAGAT
ACACTGAAAG CATTGCTGAC AGACAGCCAT ATCTCCAACT GGGCGAATGA TCCGCATGTA
ACGGGTGCTT ACAGCTACAG TACACCGGCC ACAGCGGCGG CACAGGTATT ATTGAATACA
CCGGTGGAAA GCACCCTCTA CTTTGCCGGA GAAGCCCTGT ATAAGGGCGC CAGTCCGGGT
ACAGTAGAAG CAGCGCTCAG CACAGGTAAG GGGGTTGCAG AAAGGATCTT ACAGGGAATT
AAGAATTAA
 
Protein sequence
MRTSEEIIII GAGAAGLLAA RELSAHHSVT VLEARDMIGG RIQTVYRDGV KSAETGAEFV 
HGELPITLGL LKEAGLSYYH IYGKMFQVRD GKWDARYEMI EDWDGLLEKM SSIPTDTTMQ
AFLDEQYPVE QYVSLHESVK SFVQGYDLAD MTRVSVKALY SEWTNESENN FRIDQGYTAM
VRYLEDVCLR QQARIVTSAV VRHIEWSAGK VTVTTEAGAT YTAHKVIIAV PLGILQQGHI
HFSPALPDQM AAANNIGWGT VIKTVLEFKE PFWEKQAPQV GFVLGKAPIP TWWTQLPDKA
NVLTGWLGGP PAFPHLHKTD DELLEMALQS LAILCNEDAD TLKALLTDSH ISNWANDPHV
TGAYSYSTPA TAAAQVLLNT PVESTLYFAG EALYKGASPG TVEAALSTGK GVAERILQGI
KN