Gene Cpin_3267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3267 
Symbol 
ID8359433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4022351 
End bp4023850 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content49% 
IMG OID644965440 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_003122935 
Protein GI256422282 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1404] Subtilisin-like serine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.112801 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAA ATCGACTATT GGCCCCCGCG TTCCCCGTTA TTATGCTGAT GCTGATGACC 
ATCGCCTCCT GTACAAAAGA CGACAAGATC CTAAACGTTC GTAAAGGCGT ACTGACACCC
CAACAACACC AGGACAGAGG TTTTCTTATT ATCGCCAAGG AAGGCGCTAA ATTAGCCGGC
ATCTCCGAGA GCCTGACCAA ATTACGTGTC AAAGATTTTA AGCTGAAAAC AGCCAACCAG
GAGCTGGGTC TGATACGTGT ACAGACGCCC GACCCTTCCT TCCCTGAAAA AGCAAGACAG
ATCGCAGATG TGCAGTCTGT AGTAGTGGAC GTTGTCATGA ACTGGCGGCT ACCCGAAAAA
ACCTTCCGTG CCAGCAAACC TTCTCAGCCT GTTGCCAATG CAAAGCTGAA CAATCCATTA
GCCAACAATC CTTTCAGTCC ATTACAGTGG GGCCTTCAAT CAGTGAAAGC ACCACAGGCA
TGGGCAAAAG GCTACAGAGG ACGCGGCGCG AAAGTAGCGG TGCTTGATGG CGGTTTCCTG
CTGGAAAACC CTGAAATCAA GCCAAACATT ATCCTCACCC ACAACTTCAT CGAAGGCGAA
GAAGTGCAAT ACCACGGTAT TGAAGGATTC AGCCATGGTA CGCACGTAGC GGGTACCATC
GCCGCCATCG ACGACGCCAA TGGCGTAGTA GGTGTTGCCC CTGATGCAAA ACTGATTCTA
GTAAAAGTAT TGAATGACGC CGGCAGCGGC GCCTTCAGCG GTATCATTGA TGGTATCTTT
TATGCTTCCA ACCATGGCGC TGACGTCATT AACATGAGTC TTGGCGGAGA ACTGCCACGT
AAGACCTATA CGGATGACAA CGGTACGCCC GACGATCCTT CCGATGACTA TGTTGTACAA
TACGACAGAG ACGTGAAGGA CCTGATCATC GCCATTAACA GGGCCACTTT ATATGCGACC
CTCCGGGGTA CGACTATCGT AGCAGCAGCA GGCAATGATG CCTATAACTA CGATGTTGAA
AAACGCTTCA TCACCTACCC TGCCGCAGCG CTGGGTGTTA TCTCCATTGC GTCTAACGGT
CCGCTGGGAT GGGGTATCAA CCAGGATACT TCCCTGTACC TGCCTTCCAT CTTTACCAAC
TATGGTAAGA ACTTTATCTC CTACGGCGCA CCTGGTGGTA ACTACAGCAT TCCGCTGAAT
ACGCAGATCG TGACTGTAGC AGGTATCACC TACTATGAAT ACGTATTTGA TTTCATCTTC
AATATCGGTT TCTGGGATGA AGCCACGAAT GAATTCAGCT ATGGATGGTC AGCTGGTACC
AGTATGGCAG CTCCTCATGC CAGTGCGGTG ATTGCATTAC TGTATGGCAA ACATCCAAGG
ATCAGTCCTG TACTGGTAGA ACTTATATTG CGCAAATCAT CCAATGATTA TGGCGCTCCC
GGCAAAGATC CGTTCTTCGG CAATGGACAG ATCAATGCGG GAAAAGCAGT TAGTTATTAA
 
Protein sequence
MKRNRLLAPA FPVIMLMLMT IASCTKDDKI LNVRKGVLTP QQHQDRGFLI IAKEGAKLAG 
ISESLTKLRV KDFKLKTANQ ELGLIRVQTP DPSFPEKARQ IADVQSVVVD VVMNWRLPEK
TFRASKPSQP VANAKLNNPL ANNPFSPLQW GLQSVKAPQA WAKGYRGRGA KVAVLDGGFL
LENPEIKPNI ILTHNFIEGE EVQYHGIEGF SHGTHVAGTI AAIDDANGVV GVAPDAKLIL
VKVLNDAGSG AFSGIIDGIF YASNHGADVI NMSLGGELPR KTYTDDNGTP DDPSDDYVVQ
YDRDVKDLII AINRATLYAT LRGTTIVAAA GNDAYNYDVE KRFITYPAAA LGVISIASNG
PLGWGINQDT SLYLPSIFTN YGKNFISYGA PGGNYSIPLN TQIVTVAGIT YYEYVFDFIF
NIGFWDEATN EFSYGWSAGT SMAAPHASAV IALLYGKHPR ISPVLVELIL RKSSNDYGAP
GKDPFFGNGQ INAGKAVSY