Gene Cpin_3134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3134 
Symbol 
ID8359299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3865463 
End bp3866227 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content42% 
IMG OID644965307 
ProductMethyltransferase type 11 
Protein accessionYP_003122803 
Protein GI256422150 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.578288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCCCTT TTTCCAGTAA GCTGCTGCGT ATTGAAAATT ATTTTTATTT TTACCAGATG 
CCAGACAGAC AAATACCTTA CGCTTTTAAC CCGGACATAC GCTATCCGGC CTATCTCACA
AGGAAGGCGC TCCTGAATGC GCTGACTATT TACATTCCTC AATTGAAAGG GCGTTTAATG
GATTTTGGCT GTGGTTCAAA ACCCTATAAG AGTCTGTTTT CTGTGGATGA ATATATCGGT
GTGGATTATG ACAGTGAAGG CCATCCGCAT GATGACGAGC CTGTAGATGT TTTCTATGAT
GGCAGACACC TGCCTTTCCC GGATCAGCAT TTTGATGCAG TGTTCAGTAC CGAGGTATTT
GAGCATGTAT TCAACCTGGA AGAGATTTTG CTGGAGATCA ATAGGGTAAT GAAATCAGGA
GGTCGTATAC TGATCACTTG TCCGTTTGCG ATCTGTGAGC ATGAAGAACC CAACGATTAT
GCCCGTTATA CGCAATTTGC ATTGCGCAGC CTATTTGAAA AGAGTGGTTT TAAAGTATTG
CAGATAGATA AAACCGGCGG TAACATAGAG ACGATTATGC AATTAAAGAT TACTTATGTA
GCGAAGCATA TTCTACCAGT TTTCCGTAAA ATACCGGTTG TAAGGTCATT GGCCCGTCTG
GTCGTATATA GTTCCATGAA CCTGTATGCG ATGGTGTTAG CGGCTATTTT GCCCCGCAGA
AAGGATCTTT ATCTGAATAA TGTCCTTTTG TGTGAGAAGT TATAA
 
Protein sequence
MFPFSSKLLR IENYFYFYQM PDRQIPYAFN PDIRYPAYLT RKALLNALTI YIPQLKGRLM 
DFGCGSKPYK SLFSVDEYIG VDYDSEGHPH DDEPVDVFYD GRHLPFPDQH FDAVFSTEVF
EHVFNLEEIL LEINRVMKSG GRILITCPFA ICEHEEPNDY ARYTQFALRS LFEKSGFKVL
QIDKTGGNIE TIMQLKITYV AKHILPVFRK IPVVRSLARL VVYSSMNLYA MVLAAILPRR
KDLYLNNVLL CEKL