| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3133 |
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| Symbol | |
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| ID | 8359298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3862619 |
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| End bp | 3864949 |
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| Gene Length | 2331 bp |
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| Protein Length | 776 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644965306 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_003122802 |
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| Protein GI | 256422149 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.989614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.593866 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGCATC CTTTTTTACA GGTGAACAAA CTCCATGCAC AATCGCAGAC AAACGCAGCT
CGTACCGGTG ATTTGCGCGG ACAGATCACT ACAGAAACGG GGCAACCATT GGCGGATATC
ACCGTAAGAC TACATGGCAC CGGTCATGGT ACAGTAACGG ATACGGAGGG CCGCTTTACG
TTTTCAAACA TCCCTGAAGG GACATATACA CTCGCAGCCA GCGGCGTAGG TTACCACACT
GGTAAACACC CGGCTGTTGT CACCGGCGGA CAAACAACCT CTCTCTCCTT TCAGCTGAAC
AGCCATACCG GCCAGCTATC GGAAGTAACA GTGAGTACCG CACAGGTATC CTCCTTTGCC
GGTATTAATA AAATAGCGGT TCCTGTCAGA GACTTACCGC TGACCACCTC CGCAGTTTCT
GCCCGTACAC TTGAACAAAG AGGGACAGAC GATCTGGGAG AAGCCATAAA AAACACGACA
GGCGTACGTG CCAATACTAC CTATGGCGGT TTCCAGCACT TCACTATCCG TGGTTTCAAC
AACTTTGTGT TACTCGTAGA CGGTGTCAGA GATGAACGTC ATAACATCTC TACCAGTGCC
CCCAGTACGA ACCTGGCTAA TATTGAGCGT ATTGAAGTAC TGAAAGGACC CGCCTCTGTA
TTATTTGGGC ATTCCGCACT GGGTGGTATC ATTAACCTGG TACGCAAACG TCCTTCTAAG
GAACAGAAAG CAGAATTCTC CGCCTCTTAT GGCAGCTTTA ATACCCGTCG TATGCGTGCT
GGTGCAGGTG GTGCAATCAA TAATAAACTC GCCTACAGAG TAGACGTCGG ATTATCAGAA
ACAGATGGCT ATCGCCAATC AGGCGTCAAT ACTAACAATG CTTATCTTGC CTTAGAATAC
ACACCAACCT CGCGTGACAA CTTCTATCTG AGTGTTGGCG CTAACAAAGA CAAATATGAT
ACAGATGCAG GTATTCCCGT AATGGAAGGC GGTAAGATCG CCCCGGGTAT GAGCGTTGAT
ACACGTTACA ATGATCCCGC GGATTTCCTG AAGAATACCC GCTACGATTT CCAGCTGCGA
TATACGCATC AGTTCAACAG TAAACTCGTA CTGTCTGACC AACTGTCTTA CTCCTACGAT
AACATCGATT ATCTTTCAAC AGAGGAACTG ACCTTCAACG AAGGAATGGA CTCGCTGACA
CGTACCTCTC CCCTGTATTT TAATCATATC ACCAAACCCC TGCAAAACCA GCTGGAGCTG
ACGTATACGA CGCAAACAGG TAATATCGGG CATAAATTAT TGTTTGGTTA TTCCCTCAGC
ATCTTAGATC GTAAAACTTA CAACGGTAAT ATTTCTGGTA GCGGACTTTA TGCACAGATC
GCGGTACAAA ATCCGGTGCT GAGTCAGGGT AATATCGATT ATTATCAGAC ACAGTACAGG
GCGACAGAAG AGCAGGTACA TGGCTTCTAT GTACAGGAAT GGCTGAAGTT ATCGGATAAA
CTGAAAGCAT TGGCGGGCCT CCGTTATGAT CTCTTCAGGG GCACTTATTA TACCAATAAG
ATAGACAGAA CTCACCATGT AACAGATAAA GGCGCCAAAA CAGACATCCC GTCTTCCGCA
TTCACGTACC GCGCAGGACT GGTATATCAG CCCATTGAAG CATTGTCCGT ATACGGGTCT
TACTCCACCT ATTTCAAACC TTCCCGCAGG GTTGCACCTA ATGGTGAAAC CTTTGATCCG
GAAGATGGTT ACCAGGCAGA ATTCGGTTCC CGGCTGGACC TGAGCAAAGC ATGGTCACTC
ACTGGTTCGC TTTATTATAT GAGAAAGAAT AACCAGGTGG AGAGTCTGCC GGGTGGTCTA
TACAAACGTG TTGGTGCTGC GGATTCCAAA GGATATGAAA TCGAATTGCA AGGTAGTCCG
CTGGCAGGGC TTGATGTCAA TGCCGGGTAT ACATTTACGG AAGCAAAGTA TCGTCCTTTT
GCAGGAAGTG AGATCAATGC TGTTGCAGGC AAAACAGTGG CGCTGGCGCC TGAACACATG
GCCAACATAT GGGTAAACTA TCAACTGCAA CAAACTGCCT TACGTGGTCT GAGTCTGGGG
ATGGGTATGA ATTACATGAG TGATACTTAT GCCAACAGTA ATAATACATA TGTATTGCCG
GCATATACCA TACTGGATGC AGCCATTGGC TACCAGACCG GTAAAATTGG GCTGCGGTTG
AATGTAAACA ATATCGCCAA CGAGCGTTAC TTCGCCAATG TGATTATTAC AAATCAGTTC
TATCCGGGTG CTACCAGGAA TTATCTGCTG ACTTTTAAAT ATTCCCTCTG A
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| Protein sequence | MVHPFLQVNK LHAQSQTNAA RTGDLRGQIT TETGQPLADI TVRLHGTGHG TVTDTEGRFT
FSNIPEGTYT LAASGVGYHT GKHPAVVTGG QTTSLSFQLN SHTGQLSEVT VSTAQVSSFA
GINKIAVPVR DLPLTTSAVS ARTLEQRGTD DLGEAIKNTT GVRANTTYGG FQHFTIRGFN
NFVLLVDGVR DERHNISTSA PSTNLANIER IEVLKGPASV LFGHSALGGI INLVRKRPSK
EQKAEFSASY GSFNTRRMRA GAGGAINNKL AYRVDVGLSE TDGYRQSGVN TNNAYLALEY
TPTSRDNFYL SVGANKDKYD TDAGIPVMEG GKIAPGMSVD TRYNDPADFL KNTRYDFQLR
YTHQFNSKLV LSDQLSYSYD NIDYLSTEEL TFNEGMDSLT RTSPLYFNHI TKPLQNQLEL
TYTTQTGNIG HKLLFGYSLS ILDRKTYNGN ISGSGLYAQI AVQNPVLSQG NIDYYQTQYR
ATEEQVHGFY VQEWLKLSDK LKALAGLRYD LFRGTYYTNK IDRTHHVTDK GAKTDIPSSA
FTYRAGLVYQ PIEALSVYGS YSTYFKPSRR VAPNGETFDP EDGYQAEFGS RLDLSKAWSL
TGSLYYMRKN NQVESLPGGL YKRVGAADSK GYEIELQGSP LAGLDVNAGY TFTEAKYRPF
AGSEINAVAG KTVALAPEHM ANIWVNYQLQ QTALRGLSLG MGMNYMSDTY ANSNNTYVLP
AYTILDAAIG YQTGKIGLRL NVNNIANERY FANVIITNQF YPGATRNYLL TFKYSL
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