Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3117 |
Symbol | |
ID | 8359282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 3836832 |
End bp | 3837779 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644965290 |
Product | glycosyl transferase family 2 |
Protein accession | YP_003122786 |
Protein GI | 256422133 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.199374 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATTT CCGTAATCGT TCCCTTAAAA AACGAAGAAG AATCACTGCC TGAACTGGCT GCCTGGATTG ACCGTGTCAT GCAGGAGCAT CGATACTCAT ATGAAGTATG GATGATAGAT GATGGCAGCA CTGATAATTC CTGGGATATC ATTCAGCAAC TCGCCGCCAG CAATCCAAAT ATAAAAGGCA TCAAGTTTCA ACGTAACTAT GGTAAATCCG CCGCCCTTAA TGAAGGCTTC AGAGCCGCAC AGGGCGATGT GGCGATTACT ATGGATGCCG ACCTGCAGGA TAGTCCTGAC GAAATTCCTG AACTATACCG CATGATCAAA GAAGATGGCT TTGACCTGGT CAGCGGCTGG AAGAAGAAAC GTTACGACAG CGCACTCACC AAAAACCTTC CCTCCAAATT ATATAACTAT ACCACTACCC GCATGAGCGG TGTAAGGCTG CATGACATGA ACTGCGGACT CAAATCCTAC AGTCGTAAAG TCATCAAAAG CATAGAGGTA TATGGAGAAA TGCACCGTTA CATCCCGGTT ATCGCCAAAT GGAACGGTTT CAGGAAGATT GGTGAGAAAG TGGTAGAGCA TCGCGCCCGT AAATACGGCA CCTCCAAGTT TGGCCTGGAA CGCTTCATCA ACGGCTTCCT TGACCTGGCT TCCATCATGT TCATCAGCAA ATTCGGAAAA CGTCCGATGC ACCTCTTCGG CGCACTGGGC ACACTTTCCT TTATACTTGG TTTTGGTATC TCCGTATACC TGGCCATTCA GAAATTTGCC TACTCCCAGT ATAAGATGAC CGAGCGTCCT CTCTTCTACC TGGCCCTGCT GGCAATGATC ATAGGGTCAC AGTTATTCCT TACCGGCTTC ATCGCCGAGC TGGTCACCAG GAACGCGCCG GAGAGGAATG AATATCTTGT GGAATCTATC CTTGATCGCA CTAAATAA
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Protein sequence | MDISVIVPLK NEEESLPELA AWIDRVMQEH RYSYEVWMID DGSTDNSWDI IQQLAASNPN IKGIKFQRNY GKSAALNEGF RAAQGDVAIT MDADLQDSPD EIPELYRMIK EDGFDLVSGW KKKRYDSALT KNLPSKLYNY TTTRMSGVRL HDMNCGLKSY SRKVIKSIEV YGEMHRYIPV IAKWNGFRKI GEKVVEHRAR KYGTSKFGLE RFINGFLDLA SIMFISKFGK RPMHLFGALG TLSFILGFGI SVYLAIQKFA YSQYKMTERP LFYLALLAMI IGSQLFLTGF IAELVTRNAP ERNEYLVESI LDRTK
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