| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3092 |
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| Symbol | |
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| ID | 8359257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3807845 |
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| End bp | 3809152 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644965266 |
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| Product | MiaB-like tRNA modifying enzyme YliG |
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| Protein accession | YP_003122762 |
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| Protein GI | 256422109 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.949904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.038543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGACAA AAACTTTAAA GAAAGATAAG GTTAATATTA TTACGCTTGG CTGTTCCAAG
AATATGGTTG ATTCTGAAGT GCTCAGCGGT CAGTTACTGG CCAATGAAAT CGATGTGGTG
CATGAAAGCG CCAAAAAGGA TCACAATATC GTTGTTGTAA ATACCTGTGG CTTTATTGAT
AAGGCCAAGG AGGAATCTAT CAACACCATC CTGGAACAGA TTGAGTTGAA AAATCGGGGT
CGCCTGGAGA AAGTATATGT AACAGGTTGT CTTAGCGAGC GTTATCGCGG AGACCTGGAA
AGTGAAATTC CTGGTGTAGA TGCCTGGTTT GGTACAATGG AGTTGCCATT GATCCTGAAA
AAGTTCGATG CTGATTATAA GGCAGAGCTG ATCGGTGAAC GTCTGCTGGC TACTCCTACG
CACTATGCTT ACCTGAAAAT TGCTGAAGGA TGTAACCGTA CCTGCTCATT TTGCGCTATT
CCGTTGATGC GCGGTGGTCA CGTATCCCGT CCTATCGAGC AACTGGTAGC AGAAGCGGAA
AAACTGGTGA ATTCAGGTGT GAAGGAGATC ATGCTGATTG CACAGGAACT GACTTATTAC
GGTCTGGATC TGTACAAGGA GCGTAGACTG GCCGACCTCT TAAGAGCGCT GGCACAGGTG
AAAGGTCTGG AATGGATCCG TCTGCATTAT GCTTACCCGC ACAAATTCCC GATGGAAGTG
CTGGACGTAA TGAATGAATT CCCGAATATT TGTAAGTATA TTGATATGCC GTTGCAACAC
GCGGCCGATA ATATGCTCAA ATCCATGAAA CGTCAGATTA CACGCGTTGA AATGGAAGAT
CTGATTACCG CTATCCGTGC AAAAGTACCC GGCATCTGTC TGCGTACCAC GCTGATCACC
GGTTATCCGG GTGAGACGCT GGAAGACGTG GAAGAGACCA AACGCTTCCT TGAGAAGATG
CGCTTGGACA GGGTAGGCGT ATTTACGTAT AGTCACGAGG AAGGTACCAG TGCTTACGAG
CTGGAAGATA ATATCCCTGC GGAAGAAAAA GAACGCAGGG CACAGGATAT CATGGAAACG
CAACAGGAAA TTTCCCTGGA GAAAAACCAG GAAAAAGTTG GCCAGGTATT CCGTGTAATC
GTAGACAAAA AAGAATCAGG CCGTTACCTG GCTCGCACAG AATTCGATTC TGTGGAAGTA
GATAATGAAG TAATCATTAA TACCAGCAAA CGCCTGAAAC CCGGAGAATT TGTTAATGTC
AGGATCACCA AGGCATATGA TTATGACCTG GAAGGGGAAC TGGTGTAA
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| Protein sequence | MKTKTLKKDK VNIITLGCSK NMVDSEVLSG QLLANEIDVV HESAKKDHNI VVVNTCGFID
KAKEESINTI LEQIELKNRG RLEKVYVTGC LSERYRGDLE SEIPGVDAWF GTMELPLILK
KFDADYKAEL IGERLLATPT HYAYLKIAEG CNRTCSFCAI PLMRGGHVSR PIEQLVAEAE
KLVNSGVKEI MLIAQELTYY GLDLYKERRL ADLLRALAQV KGLEWIRLHY AYPHKFPMEV
LDVMNEFPNI CKYIDMPLQH AADNMLKSMK RQITRVEMED LITAIRAKVP GICLRTTLIT
GYPGETLEDV EETKRFLEKM RLDRVGVFTY SHEEGTSAYE LEDNIPAEEK ERRAQDIMET
QQEISLEKNQ EKVGQVFRVI VDKKESGRYL ARTEFDSVEV DNEVIINTSK RLKPGEFVNV
RITKAYDYDL EGELV
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