Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3067 |
Symbol | |
ID | 8359232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3783332 |
End bp | 3784096 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644965241 |
Product | ABC transporter related |
Protein accession | YP_003122737 |
Protein GI | 256422084 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAGA GGAAGATTAT CGAAGTAAAG GACCTGGTTA AGCAATATGG CGATTTTACG GCAGTTAAAG GTATCAGTTT CGATGTTTAC GAAAATGAAA TATTCGGCCT CTTAGGCCCT AACGGCGCAG GTAAGTCCAC TACTTTAGAG ATTATAGAGA CATTGAGGGA TAAAACCTCC GGAACAGTGA TCGTTGACGG GTATGACCTG GATAAGGATC CGGAATCCAT CAAAAAGCTG ATAGGGGTGC AGTTACAGAG TTCAGGATAT TATCCCGGAC TGAACCTGAC AGAACTGATA GAGCTATTCT GCGGACTGTA CAACCAGGAA GTCAATCCTA AAGAGCTGCT GGCCTCTTTT AACCTGGAAG ATAAAGCGAA AGCCAAGTAT AAAGAACTCT CCGGCGGACA GAAGCAGCGT TTTTCCATTG CCACAACGCT GATCAACAAG CCTAAGATTA TATTTCTCGA TGAACCCACA ACCGGTTTAG ATCCTCAGGC AAGACGTAAT CTCTGGGACC TGATCCAGGA AGTACGCGCC AAGGGTACTA CCGTTGTTAT TACCACACAC TACATGGACG AAGCCGAATT CCTCTGCGAT CGCTGTGCGA TTGTTGACAG CGGCCGTATC ATTGCGCTGG AGTCTCCTGA CAGCCTGATT GATCAGCTGG TAGCCGGTGG ATTTGAGCGT AAGAAAGAAG TGAAGAAAGC CAATCTGGAA GATGTGTTCA TCCACATGAC CGGCAAAGGC CTGAGAGAAG ATTAG
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Protein sequence | MEKRKIIEVK DLVKQYGDFT AVKGISFDVY ENEIFGLLGP NGAGKSTTLE IIETLRDKTS GTVIVDGYDL DKDPESIKKL IGVQLQSSGY YPGLNLTELI ELFCGLYNQE VNPKELLASF NLEDKAKAKY KELSGGQKQR FSIATTLINK PKIIFLDEPT TGLDPQARRN LWDLIQEVRA KGTTVVITTH YMDEAEFLCD RCAIVDSGRI IALESPDSLI DQLVAGGFER KKEVKKANLE DVFIHMTGKG LRED
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