Gene Cpin_3067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3067 
Symbol 
ID8359232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3783332 
End bp3784096 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content47% 
IMG OID644965241 
ProductABC transporter related 
Protein accessionYP_003122737 
Protein GI256422084 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGA GGAAGATTAT CGAAGTAAAG GACCTGGTTA AGCAATATGG CGATTTTACG 
GCAGTTAAAG GTATCAGTTT CGATGTTTAC GAAAATGAAA TATTCGGCCT CTTAGGCCCT
AACGGCGCAG GTAAGTCCAC TACTTTAGAG ATTATAGAGA CATTGAGGGA TAAAACCTCC
GGAACAGTGA TCGTTGACGG GTATGACCTG GATAAGGATC CGGAATCCAT CAAAAAGCTG
ATAGGGGTGC AGTTACAGAG TTCAGGATAT TATCCCGGAC TGAACCTGAC AGAACTGATA
GAGCTATTCT GCGGACTGTA CAACCAGGAA GTCAATCCTA AAGAGCTGCT GGCCTCTTTT
AACCTGGAAG ATAAAGCGAA AGCCAAGTAT AAAGAACTCT CCGGCGGACA GAAGCAGCGT
TTTTCCATTG CCACAACGCT GATCAACAAG CCTAAGATTA TATTTCTCGA TGAACCCACA
ACCGGTTTAG ATCCTCAGGC AAGACGTAAT CTCTGGGACC TGATCCAGGA AGTACGCGCC
AAGGGTACTA CCGTTGTTAT TACCACACAC TACATGGACG AAGCCGAATT CCTCTGCGAT
CGCTGTGCGA TTGTTGACAG CGGCCGTATC ATTGCGCTGG AGTCTCCTGA CAGCCTGATT
GATCAGCTGG TAGCCGGTGG ATTTGAGCGT AAGAAAGAAG TGAAGAAAGC CAATCTGGAA
GATGTGTTCA TCCACATGAC CGGCAAAGGC CTGAGAGAAG ATTAG
 
Protein sequence
MEKRKIIEVK DLVKQYGDFT AVKGISFDVY ENEIFGLLGP NGAGKSTTLE IIETLRDKTS 
GTVIVDGYDL DKDPESIKKL IGVQLQSSGY YPGLNLTELI ELFCGLYNQE VNPKELLASF
NLEDKAKAKY KELSGGQKQR FSIATTLINK PKIIFLDEPT TGLDPQARRN LWDLIQEVRA
KGTTVVITTH YMDEAEFLCD RCAIVDSGRI IALESPDSLI DQLVAGGFER KKEVKKANLE
DVFIHMTGKG LRED