| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3042 |
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| Symbol | |
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| ID | 8359207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3754490 |
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| End bp | 3755284 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644965221 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003122717 |
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| Protein GI | 256422064 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAATC AACAAGATCA ACAGGGAGAG CTCAAAGGCA AAATAGCCCT CGTAACAGGT
GGTACCAAAG GCATCGGAAA AGCAGTTACC GCCAGATTAC TGGAGGCAGG TGCAAAAGTG
ATCGTCACTG CCCGTAACCA GCCGGAAGAG GCTAATCCTG CTTATCATTT CATACCGGCT
GACCTTTCAC AGCCAGCAGA AGTGGTTAAA GTTACTACAG AGATCCAATC GTTATTTGGC
GGAGTGGACA TCCTTATCAA CAACATGGGC GCTAATACTT TCCCAGGAGG AGGATTCAGC
ACATTAACAG ACGATCACTG GAATCAGGCG ATGCAGATCA ATTTACTGTC GTCAGTCCGC
CTGGACCGGG CTTTATTACC CAAAATGCTG GAGCAGGGGA GCGGTGTTAT CATCCATATC
TCGTCTACCA GTGGCCAGTT CCCGATCTGG GAGTCTACGA TGGCTTATAC CGCCGCTAAA
GCAGCATTAA ATGCTTATAG TAAGTCGCTA TCGCAGGAAG TAGCTGCCAA AGGAGTCAGG
GTCATCACCG TATCTCCCGG GTTGAATAAT ACGGAGGCAA TGTCGGTTTT TCTGGAGGAT
TTGGCACAGA AGGCAGGTCT TACAGTCGAA GGAATCACCC AGCGGCTTTT CGAAAGAGTG
GGCGGTGTAC CACTTGGCAG AATGGCTGAT CCGGCAGAAA CGGCAGAACT GATCTACTTC
CTTGTTACGC CCAGAGCTTC CTATATCACG GGTGCGAATT ATGCCATAGA CGGCGGTAAT
TTCCCGGTAA TATAG
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| Protein sequence | MNNQQDQQGE LKGKIALVTG GTKGIGKAVT ARLLEAGAKV IVTARNQPEE ANPAYHFIPA
DLSQPAEVVK VTTEIQSLFG GVDILINNMG ANTFPGGGFS TLTDDHWNQA MQINLLSSVR
LDRALLPKML EQGSGVIIHI SSTSGQFPIW ESTMAYTAAK AALNAYSKSL SQEVAAKGVR
VITVSPGLNN TEAMSVFLED LAQKAGLTVE GITQRLFERV GGVPLGRMAD PAETAELIYF
LVTPRASYIT GANYAIDGGN FPVI
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