| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3039 |
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| Symbol | |
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| ID | 8359204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3750950 |
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| End bp | 3751657 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644965218 |
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| Product | Helix-turn-helix type 11 domain protein |
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| Protein accession | YP_003122714 |
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| Protein GI | 256422061 |
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| COG category | [K] Transcription |
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| COG ID | [COG2378] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.545561 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCCT CTGATATGAA ACGGTTGACG AGACTAACCG CTATCCTGAT ACGTTTACTA
ACTAAAAAGA TTGTCACAGC TTCAGAACTG GCGGCAAAAT TTGACGTGAG TGTCAGAACC
ATTTACAGGG ATATAAGAAC CCTGGAGCAG GCAGGTGTGC CCGTAGTTAC TGAAGAGGGG
GTAGGGTATA CTTTAATGGA TGGATATCGT ATACCGCCGG TCATGTTTAC CGAAAGTGAG
GCTAATGCGC TTATTACCGC GGAAGAGATC GTCTCGGGAA ATAAGGATGC CTCTTTCGTG
GCGGCATTCA GCGGCGCTAC AGCAAAGATC AAGGCATTAC TCCGGGAAAC AATGAAGGAA
AAGGTCAATT TGTTGCAAGA CAGGACCATT GTTAAGCAAG CTGCCTATAA AGAACACTCA
AGCAGCTGTC TGTCGCAATT ACAAATCTCA ATGACCAATG CGCAGCTGGT AAAAATTAAA
TACATGGATG AACATGCTGT AGCTACAGAC AGGATAATTG AACCATTTGC ATTTTACGGG
ACAGGCGACA ATTGGTTGAT AATAGCTTAC TGCAGACTGA GAAAGGACTT TCGGGTTTTC
CGCCTGGACA GGATAGTACT GTTGGAACCC TTACAAGAGA AGTTTACACC GCAAAAAATG
ACACTAAGCG AATTTTTTCA ACAGCACTAC AGCACCCCTG ACATATAG
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| Protein sequence | MPPSDMKRLT RLTAILIRLL TKKIVTASEL AAKFDVSVRT IYRDIRTLEQ AGVPVVTEEG
VGYTLMDGYR IPPVMFTESE ANALITAEEI VSGNKDASFV AAFSGATAKI KALLRETMKE
KVNLLQDRTI VKQAAYKEHS SSCLSQLQIS MTNAQLVKIK YMDEHAVATD RIIEPFAFYG
TGDNWLIIAY CRLRKDFRVF RLDRIVLLEP LQEKFTPQKM TLSEFFQQHY STPDI
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