Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2995 |
Symbol | |
ID | 8359158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 3699772 |
End bp | 3701256 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644965174 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003122672 |
Protein GI | 256422019 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000112139 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.562927 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAACA GCAAAATCTC ACAATCCATC TGGCAGGTAA TACTGGCCTC TTCCGCCGGG ACACTGATTG AATGGTATGA CTTCTACATC TTTGGTAGTT TGTCCGCCAT CATTGCCCAG AAGTTTTTTC CGCCCAGCAA TCCTGATCTG GCCTACATTG CCACATTGGC GACTTTTGCC GTGGGATTCA TTGTTCGCCC TTTTGGCGCC ATCGTCTTTG GCCGGCTGGG TGATCTTACC GGACGTAAGT ACACCTTCCT GCTCACCCTG TTGATTATGG GCGGCTCTAC CTTTGCTATC GGGCTGGTAC CCGGTTATGA CAGCATTGGT ATGATGGCCC CGATCATAGT ATTGTTGCTC CGTCTGCTAC AGGGCCTTGC GCTCGGTGGT GAATATGGCG GCGCCGCTAC GTATGTCGCA GAGCATTCTC CGCATGACCA GCGGGGATAT TACACCAGTT TTATTCAGAC GACCGCCACC CTTGGCCTGT TCGTCTCGCT GGCGGTAATT CTGCTGACAC GTTCCAGTCT GACACCGGAA GACTTTAACG CCTGGGGCTG GCGTATTCCT TTCTGGCTGT CCATTTTGCT GGTCGTGATG TCCTACTACA TCAGGATCCG TCTGAAAGAA TCGCCCCTGT TTGCCAAACT GAAATCAGAA GGCAAAACCT CACTCAATCC CATCAAAGAA AGTTTCGGTA AAAAAGAAAA CCTCCGCCTG GTATTACTGG CACTTTTTGG TGCTGCCATG GGTCAGGGCG TGATCTGGTA CACAGGTCAG TTTTATGCAT TGTCATTCCT CCAGAAAACG ATGCAGGTAG AATTTGTACA GTCCAATATT ATTATCGCCG TCGCCTTGTT ACTTGGCACT CCTTTCTTTA TTTACTTCGG TAAATTATCT GATAAGATTG GCCGTAAGAA GATTATGATG ACGGGTATGC TGATCGCCGC GTTGGCTTAT TATCCGATTT ATGCCGGTAT GGATCGTATC GGTGATCTCA GTAAGAAAAC AGAAGACGTT CCCCGTTTCA GTATTGAGAA CTCCATCAGT CGTAATGACA AAATGCAGAA TATCGAAAAA TCTGTAAAAA CAACTACTTA TACAGATGGA GCAAAGTACC GGGAAACAAC GATCTCCACT GATGGAAAAA CAGAAACCAT CAAAGAGGTC ATCGTCAGCA ATACACAACT CTGGCAGCTG ATCTTACTGG TATTCATACA GGTGGTTTTC GTCACTATGG TTTACGGACC CATTGCCGCA TTCCTCGTAG AACTGTTCCC TACCAGGATA CGGTATACGT CCATGTCATT GCCTTATCAC ATCGGGAATG GCGTCTTCGG CGGATTGTTG CCTACAGTGG CCACACTGCT CGTTACCGAA ACGCACAATC ACCTGGCAGG ACTTTTATAT CCTATCGCGA TTGCACTGGT CTGCTTCGTG ATAGGTGTCA CCGGGATTAA AAAGAATATG ATCAGTGAGG AGTAA
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Protein sequence | MNNSKISQSI WQVILASSAG TLIEWYDFYI FGSLSAIIAQ KFFPPSNPDL AYIATLATFA VGFIVRPFGA IVFGRLGDLT GRKYTFLLTL LIMGGSTFAI GLVPGYDSIG MMAPIIVLLL RLLQGLALGG EYGGAATYVA EHSPHDQRGY YTSFIQTTAT LGLFVSLAVI LLTRSSLTPE DFNAWGWRIP FWLSILLVVM SYYIRIRLKE SPLFAKLKSE GKTSLNPIKE SFGKKENLRL VLLALFGAAM GQGVIWYTGQ FYALSFLQKT MQVEFVQSNI IIAVALLLGT PFFIYFGKLS DKIGRKKIMM TGMLIAALAY YPIYAGMDRI GDLSKKTEDV PRFSIENSIS RNDKMQNIEK SVKTTTYTDG AKYRETTIST DGKTETIKEV IVSNTQLWQL ILLVFIQVVF VTMVYGPIAA FLVELFPTRI RYTSMSLPYH IGNGVFGGLL PTVATLLVTE THNHLAGLLY PIAIALVCFV IGVTGIKKNM ISEE
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