| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2968 |
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| Symbol | |
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| ID | 8359131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3661118 |
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| End bp | 3661705 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644965149 |
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| Product | metal dependent phophohydrolase |
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| Protein accession | YP_003122647 |
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| Protein GI | 256421994 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4341] Predicted HD phosphohydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03276] phosphonate degradation operons associated HDIG domain protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000380455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.000533169 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAACTGA ACAGGCAGGA GATTGAAGCG CGTATAGAGG CCATCTTCAA TCTGTATAAT
AAGTACGGTC AGGAGGAATA CGGAGAAGGC GTTACACAAT TAATGCACAT GGTGCAGGCG
GGTAAACTGG CGCAACAGGA AGGTTACGAT AATGAAATGA TACTGGCTGC TTTTTATCAT
GATATCGGGC ATTTCCTGGA ACACGGGGAA AGCATGGGGG TATACGGGAA AATGGCACAT
GATCAGTTGG GCAAACAATA CCTTGCAGAA AACGGTTTCC CTGAAAAGAT GGGTATACTG
GTCGCAAGTC ATGTAGACGC CAAACGCTAT CTGACCTACA GCAATGCAGC CTATTACGAC
CTGCTTTCCG AGGCTTCCAA AAAGACACTG GAATACCAGG GCGGACCGAT GACGGCTGAA
GAAGCAGCCG ACTATGAAAA AGATCCTTTG CTCGACAGCT ATATCAAGCT GCGTTACTGG
GATGACCAGG CCAAAGAGAT CGATATACCG GTAAATCCGG CGGATGTGCA GATGTTCCGG
GAACTTACGC TGCAATACCT GCTGGCATAC CATGGATTAC CTGCATAA
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| Protein sequence | MQLNRQEIEA RIEAIFNLYN KYGQEEYGEG VTQLMHMVQA GKLAQQEGYD NEMILAAFYH
DIGHFLEHGE SMGVYGKMAH DQLGKQYLAE NGFPEKMGIL VASHVDAKRY LTYSNAAYYD
LLSEASKKTL EYQGGPMTAE EAADYEKDPL LDSYIKLRYW DDQAKEIDIP VNPADVQMFR
ELTLQYLLAY HGLPA
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