| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2912 |
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| Symbol | |
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| ID | 8359074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3590086 |
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| End bp | 3591543 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644965093 |
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| Product | transcriptional regulator, GntR family |
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| Protein accession | YP_003122592 |
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| Protein GI | 256421939 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.784119 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAGTT ACAGGCATGT GCAGATCCAG TTGTCGTTCA ACAAGAATGA GCCGATATAC
CAACAGATCA AAGCATATAT AATTAATGAA ATCGTGAGAG GCAGGCTTCT CCCGGGAGCC
TTATTGCCAG GGTCCAGGGT ACTTGCTCAG CAACTTAGAG TTAACAGGAA TACGGTCATG
CTTGTGTATG ACCAGCTAAT TGCCTCGGGA TGGCTTACTT CTCATTACAA GAGTGGCACC
CGGGTGAGTG ATAGTATGCC CTCAGGGCAT ACGGGTCCAC CGGGACAGGA TAATCCGCCG
AAACAGCCCC TCCAGATCCC TTTCCGTCAT GTGAATATCT CTCTCCCCCC ATCCAATCCG
AGTGGTAATT ATGATATAAT ATTTGATGAT GGTCTGCCAG ACCTCAAACT GATCCCTGTT
GCCGAAATCA CCAGAGAATG CAGAAGGCTT GTGCAACAGG ACGACCAGCG TACTATATAT
AATAATAATA GTGAGCGGGG AAACGAGTAT CTGTTGCAGG AGATCAATGC AATGTTAAAT
AATGACCGCG GACTGGCTGT TACTACAGAG AACATTTGTA TTACACAGGG AGGACAGATG
GCTTTATACC TGACGGCGCA AACACTTTTG TCGCCTGGCG ATCACGTAGC TGTGGAGCAG
CCGGGATATC AGCCGGCATG GCAGGCATTT GCGATGGCGG GCGCTCAATT GCATTATATA
CATTCTGATG AACAGGGTAT TAACCTGGAT GAACTGGAAT CACTTTGTCA GCAGACACCG
TTGAAGGCAT TATATATTAC GCCGCATCAT CAGTATCCGA CTACAAGTAC ATTATCCGTA
GAGAAGCGTC AGCAGCTGCT GGCGCTGAGT GAGCAGTATA ACTTTATGAT CATAGAAGAC
GACTATGATC ACGAGTATCA TTTTCATACA CATCATATAC CACTGGCTGG TATGCCACAT
GCGGACAATG TGATCTACAT AGGATCGGTA ATGCATACAC TACCGATCAG CTTTGTGTGT
GGTCCGGCGG ACTTTATCAA GTCCCTGGCT GCTTATCGCA GTATTGTGAA CAGAGAGGGT
GATCCGGTAT TACAACAGGC GGTTGCCAAT CTGATGATAG CGGGCGATAT CAGGAAGCAC
ATTCATAATA CCCGTTACGT ATATATGAAA AGACTGGATC TGGCCCACAA TATCATACAC
TCTGTCTTTG CCGGACAGGC GCATTATACG CGTCCACAGG GAGGACTGGC CATATGGCTA
CAGTTGTATA AACAGGTGGA GTCAGAACAC TTATTACAAA AGATGCAGTC GGCAGGTGTG
AACGTAGTGA ATCCGTTAAG TTATTATAAT CCTAAGTACA GTCATGCGCC GGGTTTGCGG
CTTGGTTACG CGTCAATGGA TGAAACGGGC ATTATAAAAG GATTGGGAAA ACTGGCAAAG
GTGATTCAGC AATTATAA
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| Protein sequence | MKSYRHVQIQ LSFNKNEPIY QQIKAYIINE IVRGRLLPGA LLPGSRVLAQ QLRVNRNTVM
LVYDQLIASG WLTSHYKSGT RVSDSMPSGH TGPPGQDNPP KQPLQIPFRH VNISLPPSNP
SGNYDIIFDD GLPDLKLIPV AEITRECRRL VQQDDQRTIY NNNSERGNEY LLQEINAMLN
NDRGLAVTTE NICITQGGQM ALYLTAQTLL SPGDHVAVEQ PGYQPAWQAF AMAGAQLHYI
HSDEQGINLD ELESLCQQTP LKALYITPHH QYPTTSTLSV EKRQQLLALS EQYNFMIIED
DYDHEYHFHT HHIPLAGMPH ADNVIYIGSV MHTLPISFVC GPADFIKSLA AYRSIVNREG
DPVLQQAVAN LMIAGDIRKH IHNTRYVYMK RLDLAHNIIH SVFAGQAHYT RPQGGLAIWL
QLYKQVESEH LLQKMQSAGV NVVNPLSYYN PKYSHAPGLR LGYASMDETG IIKGLGKLAK
VIQQL
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