| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2894 |
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| Symbol | |
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| ID | 8359055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3574754 |
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| End bp | 3575617 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644965074 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003122574 |
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| Protein GI | 256421921 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGTA AAGTTGTATT AATAACAGGA ACCAATAGTG GATTTGGATA TGTAACAGTA
AAAACGCTTG CTTCCTTGGG GCACCGCGTG TACGCTACAA TGCGGGATAT ACAAGGAAGA
AATTCGGATC AGGCCAACGA GCTTTCTGCC ATACCGAATG TATCGGTATT GGAGTTGGAT
TTGACGGATG AGAACAGTGT CAGTGATGCA GTTGCTACTG TGATCGCTAA GGAAGGTGCG
ATAGATGTAC TGATTAATAA TGCAGGCTTT TCAATGGTCG GTTTCGCAGA GAGTTTTACC
GTTAGGGATG TACAGGAGCT TTTTGATGTC AACGTTATCG CGCCCTGGCG CTTAATAAAA
ACGATATTGC CGACAATGCG TAATCGGGCT GATGGGCTTA TCATCAATAT CAGCAGCGGA
TTTGGGAGGT TTTCATCACC TTTCTCAACC ATGTACAGCG CTACAAAATT TGGTTTAGAA
GGCATCAGCG AAGGCTTACA CTACGAATTG AGACCTTTAG GCGTGGATGT TGCCATTGTT
GAACCGGGCC CTTTCCCTAC CGGAATGATG AATAATATCA GATACGGTTC TGACCAGTCG
GTTACACCTG CTTACGAATA TTTTGCAGAA TTACCCAATA AGGTAGGTGC AGCTATTGGT
GAATTGCTGC AAACAGTTCA ACCTGACCCG CAAGAAGTAG CAGACGCCAT TAACAACTTG
ATCAATCTAT CAAAAGGACA AAGACCGCTG CGCACCGTGG TAGACAGGGC AACCGGCGAA
TTTGTAAAAG CAGCCAATGA TGCAGTTCAG GTGCAATACG AAAAGGGATT AAGAGCTTTC
GGAATGGGTG AATTGCTGCA TTAA
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| Protein sequence | MSSKVVLITG TNSGFGYVTV KTLASLGHRV YATMRDIQGR NSDQANELSA IPNVSVLELD
LTDENSVSDA VATVIAKEGA IDVLINNAGF SMVGFAESFT VRDVQELFDV NVIAPWRLIK
TILPTMRNRA DGLIINISSG FGRFSSPFST MYSATKFGLE GISEGLHYEL RPLGVDVAIV
EPGPFPTGMM NNIRYGSDQS VTPAYEYFAE LPNKVGAAIG ELLQTVQPDP QEVADAINNL
INLSKGQRPL RTVVDRATGE FVKAANDAVQ VQYEKGLRAF GMGELLH
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