| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2886 |
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| Symbol | |
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| ID | 8359047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3567231 |
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| End bp | 3567995 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644965066 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003122566 |
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| Protein GI | 256421913 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.808973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGTAT CAAAGACAGT AGCACTGGTC ACCGGTGGGA GCCGTGGCCT TGGCAGAGAC
ATCGCTTTAA AATTAGCTGC CCAGGGAACG GATGTTATTA TCACCTATAA TACAAGGAAA
GAGGAAGCCT TCGCAGTAGT TGAACAGATA AAGCACACCG GCGTACACGC TGTTGCATTA
CAACTGAGTA CAGAAAATAC GGGTGCGTTT CCCACATTCT TTACCACACT CACTGCTATT
CTGCAGACAG ACTTTCACAC CGATCGTTTT GACTATCTGA TCAACAACGC CGGTATCGGA
TTACACATGG CTTTTGAAAG CACAACAGAG GAACAATTCG ACCTGCTCCT GAATGTCCTG
TTCAAAGGAG TATACTTTTT TACCCAACAG GCACTTCATT ACACGCGGGA TGGCGGGGCT
ATTGTGAACC TGTCCAGCAG ACTGGCACAA TCAGGCGTAC CCGGTTATTC GGCATATGCA
TCTATGAAAG GCGCCGTTGA GACGCTTACC CGCTATCAGG CAAAAGAACT GGGCTCCAGA
CGTATCAGGG TGAACTCGGT TGCTCCCGGA CCGACTGCTA CAGATTTTGG TGGTGGTATC
GTAAAGGATA ATGCACAATT CAGGGCCAAC GTAACTGCAT TGACCGCATT AGGTCGTGTA
GGAGAACCAG ACGATATCGG CGGAGTAGTC GCCTTCTTAT GCTCAGATGC GGCCAGATGG
GTTACCGCGC AGCGTATAGA AGTTTCCGGC GGCATGAACA TATAG
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| Protein sequence | MSVSKTVALV TGGSRGLGRD IALKLAAQGT DVIITYNTRK EEAFAVVEQI KHTGVHAVAL
QLSTENTGAF PTFFTTLTAI LQTDFHTDRF DYLINNAGIG LHMAFESTTE EQFDLLLNVL
FKGVYFFTQQ ALHYTRDGGA IVNLSSRLAQ SGVPGYSAYA SMKGAVETLT RYQAKELGSR
RIRVNSVAPG PTATDFGGGI VKDNAQFRAN VTALTALGRV GEPDDIGGVV AFLCSDAARW
VTAQRIEVSG GMNI
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