| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2831 |
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| Symbol | |
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| ID | 8358992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3488206 |
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| End bp | 3489657 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644965011 |
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| Product | putative outer membrane protein |
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| Protein accession | YP_003122511 |
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| Protein GI | 256421858 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000620867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTAA AACGTTATTT AGCTGCCGGC TTGTTTGTAT TACTGCTGCT GCGGGGAAGC
GCTTTTGCGC AGACCACGCC GGTGGCGGAT ACTGGCAGGA TGTTTTCGCT GGAAGACCTG
GAAGGAATTG TTTTCAGGCA TCATCCTATC GTAAAACAGG CGGCATTATT AAGCGATGTG
GCAAGGGCCC ATGTACTACA GTCCCTGGGG TATTTTGACC CGGCACTGAA AGCGGCATTA
GGGCGTAAAT TATTTGGGAA TACAGAATAC TATAATAACT GGGGTGGCGA ACTGAAAGTG
CCGCTGTATG TGGCAGGCGC CGACCTGAAA GTTGGGTATG ACCGTAACGT AGGCACCTAT
ACCGCTCCCG AGACACGTAC CGGTACGGAT GGACTTACCG CAATAGGGCT GAGCATACCG
CTGGGGCAGG GAATGCTGAT AGATGCGCGA CGCAGTACCC TCTGGCAGGC AAAAGCGATG
GTTAATTACG CTGAGGCGGA CAAGGTGAAG CAGATCAACG GCGTGTGGTT TGATGCCGTT
AAAGACTACT GGAACTGGTA TTATGCCTAC AGGGAATATA TGCTCGTTAA AGAAGGAGTT
GATCTGGCCA TGAAGCGCTT CCGCGCAGTC AGCAGTCAGA CGCTCATGGG TGATAAACCT
CCTATCGACT CCATCGAGGC GGGTATTACC GTTCAGGATA GGGAAATACA GCTGGCAAAA
AGCGTCATAG AAGTGCAGAA CGCCATGCTG ATACTCTCCA ACCATCTATG GAATGAAAAT
GGGGTTCCTT TGGAGCTACC CCTTAACGCC GTTCCGCAGG AAGTAGATCA GGACCTGCAT
CTGCCTGACA GGAACCTGCT GGATACTTTA TTAGGCCAGG CTGACAGACA ACATCCAGAA
CTGGTAAAAC TGCGTGCGAA AGGTGATCAG CTGGATATTG AACGCCGTTA CCGGCAGGAA
CTGCTGAAAC CAAAGGTCAA TATCAGCGGC GCTTTATTGT CAACGCGCAG GGATTTTGGT
TCCCATGTAC CGGATTACTA CGATTTTAAC TGGAGTAATT ACAAGGTAGG CGTAGAGTTT
GCGTTTCCTC TCTTTTTACG ATCAGAGCGG GGTAAACTGA AGGAAGTAAA GATCAAACAG
CAACAGCTAA GCTACGACCT GGTGCAATCC GGTCGGGAGA TCAGTACGAC CATTACCGCG
TCATATAATA GTCTGACGGC ATATAAATCG CAAATGACCG TACAGATCCA GAGTATCAAC
AACCAACAGC TACTGCTGAA CGGTGAGTTG CAGAAATTCG ATCTGGGGGA GAGTACGCTG
TTTCTTATCA ATAGCCGCGA AAGCAAGCTG ATTGACATGA AAATAAAGCG GGAGAGTATT
ATATCCGGTT ATCAGAAGAA ACTGGCCGAA CTGTACTATA AAGCAGGTAC AAGACAGCCG
CAATATTTAT AA
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| Protein sequence | MKLKRYLAAG LFVLLLLRGS AFAQTTPVAD TGRMFSLEDL EGIVFRHHPI VKQAALLSDV
ARAHVLQSLG YFDPALKAAL GRKLFGNTEY YNNWGGELKV PLYVAGADLK VGYDRNVGTY
TAPETRTGTD GLTAIGLSIP LGQGMLIDAR RSTLWQAKAM VNYAEADKVK QINGVWFDAV
KDYWNWYYAY REYMLVKEGV DLAMKRFRAV SSQTLMGDKP PIDSIEAGIT VQDREIQLAK
SVIEVQNAML ILSNHLWNEN GVPLELPLNA VPQEVDQDLH LPDRNLLDTL LGQADRQHPE
LVKLRAKGDQ LDIERRYRQE LLKPKVNISG ALLSTRRDFG SHVPDYYDFN WSNYKVGVEF
AFPLFLRSER GKLKEVKIKQ QQLSYDLVQS GREISTTITA SYNSLTAYKS QMTVQIQSIN
NQQLLLNGEL QKFDLGESTL FLINSRESKL IDMKIKRESI ISGYQKKLAE LYYKAGTRQP
QYL
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