| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2824 |
|---|
| Symbol | |
|---|
| ID | 8358985 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 3481559 |
|---|
| End bp | 3483355 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 598 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644965004 |
|---|
| Product | acyltransferase 3 |
|---|
| Protein accession | YP_003122504 |
|---|
| Protein GI | 256421851 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1835] Predicted acyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACCA TTCAACCGGA GCACTACCGG AAAGACATCG ACGGACTCAG AGCGCTTGCT
GTCCTCTCAG TAATTATCTT TCATATGGGA TATCTACCGA ACGGATATCT CGGTGTTGAC
ATCTTCTTTG CCATCAGTGG CTACTTAATT ACGAAGATCG TCTACAATGA AGCCCTTGAA
GATCGTTTCT CTATTATCAG TTTTTATATG AGAAGGATCA GGCGTATTAT TCCACTAGTA
TTGTTTACCA CCTTTATCGC CCTGGTAACA GGGATGTTTG TCATGCTGCC GGATGACCTG
GAAAACCTCA GTCAGTCAGT CATCGCTACC AACCTGTTTG CAAATAATAT ACTATTGCTG
AAGACAGTCG GCGACTACTG GGATATTTTC AATGACTATA AACCTCTCAT GCATACCTGG
AGTCTGGGTG TGGAAGAACA GTTTTATGTG ATCTATCCCC TGATATTCCT CTTTCTTACA
GGTGCAAGAA AGAAATGGAT ACTGCCTTTG CTGATCGCAT TGACAGTCGT TTCCCTGTTT
TTCTTTTTAT CGACTTCTAA TACCTTTTCC CGGTTTTATC TGATCCAGTA CCGGTTTTTC
GAACTGGCAC TAGGTGGTTT AGGGGCTATC TTTTTTAGGA ACAGGACAAT TGATCACCGC
TATAAAATTG GCTTCCTCTT TATCATATTA TGCGTCCTGT TGTTTGGTGT GTATCTCTCA
CCAGTTGTTA ATCTGCTCTT AGTAGTGGTG TCAGCAGTGG GTTTACTATT ACCGGGCAAT
ACCAACGAAG GACTGACGAA TGCGTTCCTG GAGAATAAAT ACATGGTCTG GATAGGAAAG
ATCAGTTTCA GCCTGTATAT GTGGCATCAG ATCGTATTAG CTTATAGCCG CTACTTCGTA
TTGGAAAGAA TTGATATCGC CAGTGCGGTG GTACTCTTTC TGATCATACT GGTGTTGTCT
GTTTTGTCTT ATCAGTTCAT AGAACAGCCA TTCAGAAACA AAGCGAAGGT GAGTAGCAAA
ATGCTGCTGT CTGTATCTGC CGTAGTGCTG TTGTTAACTT CTGTGTCTTC GCTGTTTCTA
TATATGAGAT CTGGTATCAT CAGGGATGTA CCGGAATTGG GATTGTATGC GACGAATAGT
GAGGGGAAAT CAAACGGACA TTTACACCAG GCATACAATT CTCGGATCTA TGACCTGGAT
AAACTATATG CAGGCGACAG AAAGATCAAA ACGCTGGTGA TCGGGAACAG TTATGCGCGT
GATTGGTCTA ATATCCTGCT GGAATCAAAA TACGGACAGG ATCTGGATAT CTGTTACACT
TACAACATCA ATTCCTGTAA GAACATTAAG GAGCGGCTTG CGAAGGCTGA TGTGATCTTC
TTCACCGAAA TAAGAGTAGA TACCTTCCGC GCAATGACAC AACGATATGA TATTGATACG
ACGAAAGTAT GGATCGTGGG TAATAAGAAT TTCGGTACCA ACAACGGGAT CTTCTACAGA
AGGAGGGGGG ATAATAACTA CTGTACACAG CGCGTGAATA TCCGTCAGCA GGCGCTTAAA
ATAAACAATG ACCTGAAGTC ACAGTGGGGG AATAAATACA TCGATCTGAT AGGGATGGTG
ATTGATGAAA ATGGCAAAGT GCCTGTATTT ACAGATAGTT GTATGTTTAT CAGTCAGGAT
ACCCGGCACC TGACCCGTGC AGGCGCTATT TATTTCGCCC GCCTGATAGA TCATAACCAG
TCATTTACAT TGTTGAACAG ACCTTCCAGC GGACCGACCG CCAGTGCCGT CTACTGA
|
|---|
| Protein sequence | MATIQPEHYR KDIDGLRALA VLSVIIFHMG YLPNGYLGVD IFFAISGYLI TKIVYNEALE
DRFSIISFYM RRIRRIIPLV LFTTFIALVT GMFVMLPDDL ENLSQSVIAT NLFANNILLL
KTVGDYWDIF NDYKPLMHTW SLGVEEQFYV IYPLIFLFLT GARKKWILPL LIALTVVSLF
FFLSTSNTFS RFYLIQYRFF ELALGGLGAI FFRNRTIDHR YKIGFLFIIL CVLLFGVYLS
PVVNLLLVVV SAVGLLLPGN TNEGLTNAFL ENKYMVWIGK ISFSLYMWHQ IVLAYSRYFV
LERIDIASAV VLFLIILVLS VLSYQFIEQP FRNKAKVSSK MLLSVSAVVL LLTSVSSLFL
YMRSGIIRDV PELGLYATNS EGKSNGHLHQ AYNSRIYDLD KLYAGDRKIK TLVIGNSYAR
DWSNILLESK YGQDLDICYT YNINSCKNIK ERLAKADVIF FTEIRVDTFR AMTQRYDIDT
TKVWIVGNKN FGTNNGIFYR RRGDNNYCTQ RVNIRQQALK INNDLKSQWG NKYIDLIGMV
IDENGKVPVF TDSCMFISQD TRHLTRAGAI YFARLIDHNQ SFTLLNRPSS GPTASAVY
|
|---|
| |