| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2782 |
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| Symbol | |
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| ID | 8358943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3424740 |
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| End bp | 3425621 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644964962 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003122462 |
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| Protein GI | 256421809 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0157891 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAATA ATGTATTGAT ACCCGTTTAC GACTATGCCG ACGTCAACAG GCCTGGTAAT
CCTGTGAGAG GATTTCATAT TGACCGTACA ACCTATCTGG TACAACCTGA AGATGTGTCT
GAGCCGCACA GACGTTCCAA TTACAGCCTT ACGTTGTTAT TATCCGGCGA AAGCATACAA
TATATAGACT TCGAAAAATA TACCGTGAAA GCACCGGCAC TGATCATGTT ATCTCCTGAT
CAGATCTACC GGTATACCGG TGATAGCCTG TCTGAAATTG TGAACATTTC CTTCTCTCCG
GAATTTTTGC TGCCAGAAAC ATCTGCCAGT GGAATGGTGT GCTGGTCATG CGTATTTGAA
AAAGCGATTG TGCCACTTAC CGACGGACAG CTCAAAGAGC TGCTGGGCTT TGCACGCCTC
ATGCTCAGAG AAACGGAAAA TCCGCAGCCA CTCAGTGACC TGATCATCCG TAGTCAGCTG
AAATCGCTGA TGGCCGCTAC CGCCAGACTG CCGCAACTCG ATATCGCCTC TATCCAGTCG
GATACCTTAC CTAACCGTAT CGTCAGACAA TTCAATGAAC TGTCCGACAT CCATTATAAA
GATAAAACAC AGGTAGCCCA TTACGCAGAA CTGATGTTTG TAACGCCAGG TCACCTGAAT
GACACGATTA AGTCCGCATT AGGGAAGACC GCTAAACAAA TTATAGACGA AAAACGTATT
ACTGAAGCAA AGCGGTTATT GTATTGGGGT GAACATACAA TTAAAGAGAT TGCAGGACAA
CTGAACTTTG AAGATGACGG TTATTTTAAT CGCTTCTTTA AAAAACATAC AGGTGCAACA
CCTGCTTCTT TTCAACGTAG CATCCGTGAA AAGTACAATT AA
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| Protein sequence | MRNNVLIPVY DYADVNRPGN PVRGFHIDRT TYLVQPEDVS EPHRRSNYSL TLLLSGESIQ
YIDFEKYTVK APALIMLSPD QIYRYTGDSL SEIVNISFSP EFLLPETSAS GMVCWSCVFE
KAIVPLTDGQ LKELLGFARL MLRETENPQP LSDLIIRSQL KSLMAATARL PQLDIASIQS
DTLPNRIVRQ FNELSDIHYK DKTQVAHYAE LMFVTPGHLN DTIKSALGKT AKQIIDEKRI
TEAKRLLYWG EHTIKEIAGQ LNFEDDGYFN RFFKKHTGAT PASFQRSIRE KYN
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