Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2755 |
Symbol | |
ID | 8358916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 3381245 |
End bp | 3382615 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644964935 |
Product | putative transcriptional regulator, GntR family |
Protein accession | YP_003122435 |
Protein GI | 256421782 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.243959 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCAGGTA CGGCATTACC AAGTACGCGT ACACTGGCAC TTGATCTGGG GCTACACCGG AAAACGATTG TGGCAGCTTA TGAAACCCTG GTTTCGGGCA ACTGGGTGGA TAATCTGCCA CGCAAAGGCT TCATCGTATC ACCTAATTTA CCGGTCCTAA GGCCACAGTC TTACCATAAT GGCCGGATCG GCGCATATGA TGCAGATCCC GGATTTGAAT ATGAACAATC TGACAGCTTT CCTTATCCCT TATCGTTACC GGCTAAAGAC GGGATCATCA TTGATGATGG ATTTCCTGAT ATAACATTGC TTCCCAGTCA GGTGATGCTA AAAGAATATA GACATGCATT GGATCATTCC GTGTTGAAGA AAATAAGCGC AGGCTGGGAC ATCGAAGGAT CTTCAGATTG CAGACATGCG CTGTGCGACT TTTTGAACCA GACGCGGGGA ATAGATATCA AAACCGACAA TCTGCTGATT ACAAGAGGCG CCCAGATGGC GATCTACATA GCGGCGGCCC TGATCATTAA ACCAGGGGAT AAAGTGATCG TTTGTGAACC CAGCTATATC TTCGCTAATA TGGTCTTTGA GCAACTGGGG GCGGAATTAA TCCGGGTGCC GGTTGACGGT GAAGGCATGA ATACAGAAAG CGTGGAAGAG ATACTGAAAA CGCAGCGGGT CAGACTAATT TATATTATTC CACATCATCA TCATCCGACT ACCGTCACCA TGAGCGTAGC ACGGCGACAT CATTTACTCC GGTTGATCAG ACACTACCAG CTCGCCGTCA TTGAAGACGA CTATGATTAT GACTTCCAGT TTCAGTATGA ACCTTATCTG CCACTGGCCA GTGGCGATCA TGAGGGCAAC ATTATATATA TAGGATCATT GACCAAAGTC TTAGGCGCCC CTTTCCGTCT GGGCTATATG GTCGCTCCGG AAAAATTCAT CCACGCTGCC GCTACCAGGC GAATGCTAAT CAATTTGAGA GGAGATATCT TCACAGAGCA GGTCGTTTCG AATCTGATTA GGGGCGGTGA ATTGACACGT TTAATACAGA AAGCCAATAA GGTATATCGT CAGCGCTGCC ATTTCTTAGC AGATCTGTTA GATACAGAAC TGGGCGACGT GCTAAAATTA ACACGACCTA ACGGAGGTAT GGCACTCTGG CTGCGCTTCA ACCCTGATCT TCAACTGACC AAAATACTTG AAAAAGCTGC TGGCAGGGGT CTCAGGATAA TGGGGAGTAT TTACGCCAAG GGGAATAACG CAACATATAA TGCCCTTCGG TTTGGCTTTG CCTCACTCAA TGAAGCCGGG TTAAGCAAAG CCGTAAATAT CCTTAAAACA TCTATCCACA AACCGAAATA A
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Protein sequence | MPGTALPSTR TLALDLGLHR KTIVAAYETL VSGNWVDNLP RKGFIVSPNL PVLRPQSYHN GRIGAYDADP GFEYEQSDSF PYPLSLPAKD GIIIDDGFPD ITLLPSQVML KEYRHALDHS VLKKISAGWD IEGSSDCRHA LCDFLNQTRG IDIKTDNLLI TRGAQMAIYI AAALIIKPGD KVIVCEPSYI FANMVFEQLG AELIRVPVDG EGMNTESVEE ILKTQRVRLI YIIPHHHHPT TVTMSVARRH HLLRLIRHYQ LAVIEDDYDY DFQFQYEPYL PLASGDHEGN IIYIGSLTKV LGAPFRLGYM VAPEKFIHAA ATRRMLINLR GDIFTEQVVS NLIRGGELTR LIQKANKVYR QRCHFLADLL DTELGDVLKL TRPNGGMALW LRFNPDLQLT KILEKAAGRG LRIMGSIYAK GNNATYNALR FGFASLNEAG LSKAVNILKT SIHKPK
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