| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2739 |
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| Symbol | |
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| ID | 8358900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3355580 |
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| End bp | 3358804 |
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| Gene Length | 3225 bp |
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| Protein Length | 1074 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644964919 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003122419 |
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| Protein GI | 256421766 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.84904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCAAC CAAATCTAAC TAAGCTATTA GGAAGCTTAT TCATTGCCTG TTTTCTGCTA
CTGCGGGCGC AAGCCCAGGT GACCACCGCA ACTCTCAGCG GTATCGTCAA AAATGAAGCA
GGCCAGCCAT TACCTGGTGC GACTATCAGG GTGACCTTCG CCGACGCAGG CATTAACAAA
GGCCTCGTTA CGAAATCAGA CGGTAGCTTC GTAGTCCCCA ATCTTCGTGT AGGCGGGCCA
TATACCGTTA CTGCCTCATA TACCGGATTC GCCACAGAAA CTGCTACGGG TGTATTCCTC
ACACTCGGAC AAAACACCGC ACTCGACCTC CGTCTCTCCG AATCGACGGG CAAACTGAAC
GAAGTGGTGA TCAGCGGACG CTCCACTATT TTCAATGACC AGCGTACCGG TGCTTCTACC
AATATCAGTG CGCAACAGAT CCGGCAACTG CCAACGATAT CACGTTCGGC AGACGACTAC
CTGCGCATCA CACCTTCTGC TTCACCGACG TATAACGGTA TTTCCTTTGC GGGAAGGAAT
GGACAGTATA ATAACTTTTC ATTGGATGGG GCGGTGTTTA ATAACCCGTT CGGACTGGAT
GCACCAGCTC CCGGCGGACA AACAAACGCA CAACCTATCT CGCTGGATGC GATAGATCAG
ATACAAATCA ACATTGCGCC GTATGACGTC ACGCAGTCCG GATTTACCGG CGCCGGTGTG
AATACCGTAA CGAAAAGTGG TAGTAATAAG TTTGCCGGAA CAGTGTATGC ATTTTACAGG
AATGATGCTA TCTCCGGTGA TAAGATCGAC GGACAGAAAC TCAAGGTACC CACACTTGAT
CACTTCCAGG GAGGCTTCTC ACTGGGAGGT GCAGTCAAAA AAGATAAACT GTTCTATTTC
GTGAATTTCG AAACAGAACA ACGTACAGAT GGTGCAAGTG CTTACGTAGC GAGGAATAAC
AGCAACGCCG GAGATGTAAC TACGTCCCGC GTACTGGAAT CAGACCTCGT AGCCGTAAGT
AATTCACTCA GCAGTCGTTT TGGATATGTG ACAGGCCCTT ACCAGGATTA TGAGTATAAG
CGTAAGAACT ATAAATGGCT GGCGAAACTG GATTGGGTGA TCAACAGTAA ACATACGCTG
TCATTTACGT ATAACGGACT GGATGCATCG CAGGAAAAAG GTGCACACCC GAATGCGATC
AATCGCCGCG GACCGGACGC AATTACCCTG CAATTCCGTA ACTCCGGGTA CAAGATGATT
AATAAACTGC ATTCCTTCGG ACTGGAATTG AAGTCTAACT TTAATGATAC CTACTCCAAT
AAGTTCAGGG CGGTATTCAC CAGCTTCAGA GATAAACGTG ATCCGTTCTC CTCGCCTTTC
CCGGTGCTGA ACATCACGAA ATACAATGTA CCATACATCG TAGCAGGATA TGAACCGTTC
TCTATCAATA ACCGCCTGAA CCAGGACGCG TTGCAGCTGA CGGACAACTT CAATATCATC
CTGCCGAAAC ATACGCTGAC CATAGGCGCT TCTTATGAGC AGTTTAAGTT TGGGAACTCT
TTTAACCTGA CAGGATTTGG TTTTACCGTG TTCTCCGGAG TAGATATTGG TACCTTCCTG
AACAATGTAC AGACCGGACA ATATGATGCC AATGTAACTT ATGCAAAGAA CCGTGTGGCG
GCTGACCAGT GGACCTGGTA CTACCTGACC GTCGGACAGG TATCTGCTTA TTTACAGGAT
GAATTCAGCG TAGCGAGCAA CTTCAAACTG ACTTACGGCG TGCGTTTCGA TAAAGCGCTT
TATTTCCCAT CCAAAGCAAG TTATAACAGC CCTAATGTGA ACCAGGATGG AACATTCGCA
GGTACTTTTG TAACAGGTTC TCCGACTGTG CCGAATGCAG ATAACCTGAC CCTGTTTGAT
GAAAATGGTA ATCCGGTTAA GAATGGTCCC GGGCAGACCA TCGATAATAC CAGTACCCCA
AGCGGTAAGA TCCTGGTGTC TCCGCGTTTA GGTTTTAACT GGGATATCAA AGGAGATAAG
ACCGTGCAAC TGCGTGGTGG TACAGGACTC TTTACGGGCC GCTTCCCCTT TGTATGGGTA
GGTAATGCCA TAGGTAATCC TTTCACCGGT TATTACAACG TAACGGCGCA TAATTTCAAA
TGGCCACAGA TCTGGCGTTC TAATATCGGT CTGGATTATA AACTGCCTAC CGGAACAGTA
CTGACCGGCG ATTTCGCGTA TTCAAAAGAT ATCAATTCTA TGATGGTGCG TGACTATGGT
CTGGGTACAC CAACCGGCAC CCTGAACTCA GGTACCGGCG ACAACCGCGA AATCTACCAG
GCAGCTGACA AAGGAAGTAC GGCTACTTAT GTATTCACAA ACGTAAAAGC CGGTTATTCT
TACAACGCGA CATTCCAGGC ACAACAGACC GTTGGTAAAG GCTACTTTTT CATGTTCGGA
TATAACTTCC TGATTGCAAA AGATGCCAGT TCTATTTCAG CAGAGATTTC CGGTGATGCC
TTCGACCGTA ATCCGGTGTT GGGGAATGCT AACAGGGCAG TGGAATCAAC CTCCCTGTAT
GGTAACAAAC ACCGTTTTAC GCTGGCGGGT ATCAAGAAGT TTGAATATGG TAAAGGTAAA
TATGCCACGA CTGTTTCCTT CTTCGCCAAC TGGACAAGCG GTAACCGCTT CTCTTATGTG
TACGGTGGCG ACCTGAATAA TGATGGTTCT GCTGCGAATG ACCTGATGTA TGTACCTACT
GCCGCAGAGA TCAGGAATAT GAGCTTTGCT ACACTGACAG ATGCAGACGG TAACACCCAG
AATGCTGCCG CTCAAGGCGC TGCATTGGAA GCATTTATTG GTCAGGATAA ATACCTGAGC
AGTCACCGTG GTCAGTATAC CGGTAAATAT GCGGGTGAAA CACCATGGTT CAGTCAGATC
GATATGCGTG TGTTACAGGA CTTCAACTTC AAAGGTAAAG AGAAAACCAG CACTATACAG
ATCAGCCTTG ATGTGGTGAA TCTGGGTAAC CTGATCAGCA GTAAATGGGG GCTCCGTAAG
TATGCGAGTA ACAGTGGTTA CTATCAGCCG CTGGGTTTTG CAGGAAGAGA AACAAATGGT
AAAGCGATTT ATCAGTTCGA TCCTTCACAA AGAAGTACTT TCATTACTAA CCCTGACCTG
ATTTCAAGAT GGCAGTTGCA GGTAGGAGCG AGATATATCT TCTGA
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| Protein sequence | MHQPNLTKLL GSLFIACFLL LRAQAQVTTA TLSGIVKNEA GQPLPGATIR VTFADAGINK
GLVTKSDGSF VVPNLRVGGP YTVTASYTGF ATETATGVFL TLGQNTALDL RLSESTGKLN
EVVISGRSTI FNDQRTGAST NISAQQIRQL PTISRSADDY LRITPSASPT YNGISFAGRN
GQYNNFSLDG AVFNNPFGLD APAPGGQTNA QPISLDAIDQ IQINIAPYDV TQSGFTGAGV
NTVTKSGSNK FAGTVYAFYR NDAISGDKID GQKLKVPTLD HFQGGFSLGG AVKKDKLFYF
VNFETEQRTD GASAYVARNN SNAGDVTTSR VLESDLVAVS NSLSSRFGYV TGPYQDYEYK
RKNYKWLAKL DWVINSKHTL SFTYNGLDAS QEKGAHPNAI NRRGPDAITL QFRNSGYKMI
NKLHSFGLEL KSNFNDTYSN KFRAVFTSFR DKRDPFSSPF PVLNITKYNV PYIVAGYEPF
SINNRLNQDA LQLTDNFNII LPKHTLTIGA SYEQFKFGNS FNLTGFGFTV FSGVDIGTFL
NNVQTGQYDA NVTYAKNRVA ADQWTWYYLT VGQVSAYLQD EFSVASNFKL TYGVRFDKAL
YFPSKASYNS PNVNQDGTFA GTFVTGSPTV PNADNLTLFD ENGNPVKNGP GQTIDNTSTP
SGKILVSPRL GFNWDIKGDK TVQLRGGTGL FTGRFPFVWV GNAIGNPFTG YYNVTAHNFK
WPQIWRSNIG LDYKLPTGTV LTGDFAYSKD INSMMVRDYG LGTPTGTLNS GTGDNREIYQ
AADKGSTATY VFTNVKAGYS YNATFQAQQT VGKGYFFMFG YNFLIAKDAS SISAEISGDA
FDRNPVLGNA NRAVESTSLY GNKHRFTLAG IKKFEYGKGK YATTVSFFAN WTSGNRFSYV
YGGDLNNDGS AANDLMYVPT AAEIRNMSFA TLTDADGNTQ NAAAQGAALE AFIGQDKYLS
SHRGQYTGKY AGETPWFSQI DMRVLQDFNF KGKEKTSTIQ ISLDVVNLGN LISSKWGLRK
YASNSGYYQP LGFAGRETNG KAIYQFDPSQ RSTFITNPDL ISRWQLQVGA RYIF
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