| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2728 |
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| Symbol | |
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| ID | 8358889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3337026 |
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| End bp | 3341378 |
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| Gene Length | 4353 bp |
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| Protein Length | 1450 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644964908 |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_003122408 |
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| Protein GI | 256421755 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.632568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGATA AGATCATTCA ATTCTCAGTT AAAAACAAAC TGGTAATTGG GTTGTTCATG
CTGCTATGGA TTATCTATGG CATCTTTGAA GTGACCCGTC TGCCAATTGA CGCCGTACCT
GATATCACCA ACAACCAGGT ACAGATTATT ACGACCGCAC CTGCTTTGGG AGCACAGGAT
GTGGAAAGAC AGATCACCTT TCCCATCGAA CAGGCCATCA GCAACATTCC GCATCTCAAG
GAAAGTCGCA GTATGTCCAG GTTCGGATTG TCATTGATCA GTGTTGTGTT TGAAGACGAT
GCAGACGTCT ACTGGGCCCG TCAGCAGGTA ACAGAAAGAC TGCAACAGGT CGAGATAACG
GCGAATGCCC GTAAACCGGA ACTGGCACCT GTTTCCACCG GTCTAGGGGA AATATACCAG
TATGTATTAC GTCCGGAGCC CGGTTATGAA GGCAAGTACA ATCTTGCAGA CCTCCGCACC
ATACAGGACT GGCTGGTGAG AAGACAGTTG CTCGGTACAA AAGGCATAGC AGATGTATCC
ACCTTTGGCG GAGAGTTAAA ACAATATGAG GTCGCTATCA ATCCCTATCA GTTGAAATCA
CTGGGACTGA CCATTAATGA CGTCTTTACC GCACTACAGA CTAACAACCA GAACACCGGC
GGCGCTTATA TAGAAAAAGG GCCGACCGTG ATGTATATCC GTAGTGAAGG GCTGGCAGGC
AGCATTTCAG ATATTGAGAA TATCGTCGTA AAAAATACTT CTGCCGGCGT ACCTGTACTG
ATCCGGCACG TAGCCAGTGT GAGAATGGGC GCTGCTACCC GTTACGGGGC GCTTAATTAC
AATAATACCG GGGAAGTGAC CGGGGCCATC GTGATGATGC TGAAAGGGGA AAATTCCTCT
GAAGTGATCC AGAATGTAAA ACAACGTATT GCGGAGATCC AGCAGACATT ACCCGAAGGA
CTGCGTATAG AGCCCTTCCT GGATCGTACG AAAATGGTGA ACAATGCGAT TGGCACTGTA
GAGCATAATC TGCTGGAAGG TGCGCTGATC GTCATCTTTG TACTGGTGAT ATTCCTGGGC
AACCTGCGTG CGGGATTGAT CGTAGCATCT GTCATCCCCT TATCCATGCT TTTCGCCATT
ATTATGATGA ATACCTTTGG CGTGAGTGGT AATCTGATGA GTCTTGGTGC ACTGGACTTC
GGTCTGATCG TAGATGGGGC CGTGATCATT GTGGAAGCGA TTCTCCATCA CCTGCATTTT
TCTAAAAAAT ATCAGCACAT AGACAAGTTA TCCCAGGAAG AAATGAATGC GGAGGTAGCT
GGTTCTTCCT CCCGTATGAT GAATGCGGCG GTATTCGGAC AGATCATCAT CCTGATCGTA
TACCTGCCTA TCCTTTCCCT GCAGGGCATT GAGGGTAAAA TGTTCAAGCC GATGGCACAA
ACCGTCGCGT TTGCCATTAT GGGCGCCTTT ATCCTGTCTT TGACCTATGT GCCGATGGTG
AGTGCATTGT TTATCAGTAA AAAACTCACA CACAAACCGA ATCTTTCTGA CCGTGTAATG
GATAAACTGG AGCGTATCTA TCAGAAGGCG CTGAGCCGGG CATTGCGCAT ACGTAAGACG
CTGGTGGCTT TTGCCTTCGG CTTATTTGCC CTGGCAATAC TCATATTCAG CAGAATGGGG
GGTGAATTCA TCCCACAACT GGAAGAAGGT GATTTCGCCG TAGAAACAAG GTTACTGATC
GGTACAAACC TGAGTACAAC GATTGCTACT TTCCAGCAGA TCTCCGGTTT GCTGAAATCC
AAGTTTCCGG AAGTGGAGAA AATCGTATCA CGTATCGGCA GTGCGGAAAT ACCGACAGAC
CCGATGCCGA TTGAGGGAGG AGATATGATC ATTGTATTGA AAGATAAATC TGAGTGGACC
AGCGCGAAAA GTTTTCAGGA GATGGCGGAT AAGATGTCGG CGGTGGTACA AAATGCAATC
CCTGGTGTGA CCATGGGCTT CCAGTTCCCC GTACAGATGC GTTTCAACGA ACTAATGACA
GGCGCTAAAC AGGATGTAGT ATGTAAGGTA TTCGGAGAAG ACCTGGATCA ACTGGCGAAA
TATGCAGAGC AGATCGGGAA TATCAGTAAG ACGGTAAAAG GTACTGCGGA CTGGTATGTG
GAAAAGGTAA CCGGTATGCC GCAGGTGGTG ATTCGTTATA ACAGGAATGA GATCGCGAAA
TACGGTCTGA ATATCGATGA AATAAACCGT ACGGTAAATG CGGCCTTTGC AGGCGCTGCT
GCCGGACAGG TATATGAAGG TGAAAAAAGG TTTGACCTGG TCGTAAGAGT GGGTAACGAA
GGCCGCCGTA ATATCGAGGA TGTACGTAAC CTGATGATTG CTACATCCAC CGGCAACCAG
ATTCCTTTAT ACCAGGTGGC GGCTATCGAT GAAATAGAGG GACCTAATCA GATCCAGCGT
GAGAATGCCA AACGTAGAAT TACGATAGGC TTTAACGTGA GAGGTAGAGA TGTGCAGTCT
ATCGTGGAAG AATTACAGCA TAAGATCAAC AGTAAAGTAA AACTGGAACC GGGTTATACC
CTTACTTATG GCGGTGCTTT TGAGAATCTG CAACAGGCAA AAAAACGACT GAGTATTGCG
GTACCTGTAT CGCTGCTGCT CATTTTTGCG ATGTTATACT TTGCCTTTTC TTCTGTGAAA
GAAGGGGCGC TGATTTACAC AGCCATTCCG CTATCTGCTA TCGGCGGTGT ATTTGCACTG
GCGATACGCG GCATGCCTTT CAGTATCTCT GCCGGTGTAG GATTTATTGC ATTATTCGGC
GTAGCCGTAC TAAATGGTAT TGTATTGATC TCTGAATTTA ATCGTATCAA AAGCGAAGGA
CGTATCACAG ATACGTTAGA ACTGGTGATG CAGGGGACCC GTAACCGTCT GCGGCCGGTA
TTGATGACAG CTGCGGTAGC CTCTCTGGGT TTCCTGCCAA TGGCATTAAG TGATGGTGCA
GGAGCAGAAG TACAACGACC ACTGGCGACG GTGGTGATTG GTGGACTGCT GACAGCTACC
CTGCTGACCT TATTTGTATT ACCCGCCTTG TATCTCTTAT TTGAAGGAAA GAAAAAAGTG
ACGGTAAATA AGGCGGTGAT CATTGCAGGT ATCTTATTCC TGAGCATTCC TGTAGCAAAG
GCACAGGAGC GCCCGGTGGG ACTACAGCAA GCCATCAACA TTGCGATGCA GCATAATATG
CAGGCGGCGA ATGCCCGTTT GAATGAAAGA GCGGAGGGGC TACGACAAAA GACGGGTGTG
GACCTTCCCA AGACACAGTT AAACGCCGAT TACGGAAAGA TCAACAGCAT CAATAACGAT
AACCGCTTTG GTATTACGCA GGCATTGAGT TTTCCGACGG TCTATGGTCA TCAGAAAAAG
GCATTAAAAG AAAACTATCT CGCGGCACAG GCACAGACAC AGCTGGCCGA GCAGGATATA
CGGGCGAATG TCCGGAGGGT GTTCTACGAC TGGGTATGGT TGTATGAAAA GCAGCAGTTG
TTGCAGTATG CGGATAGTAT CTATCATTTA TTCGAAGAAA AGGCGACCCT GCGTTTCAAA
ACAGGGGAAA CGAATATACT GGAGCAGACA ACGGCGGTAT CTCATAGACA GCAGATTGCG
AATCAGCTGG AGATGTTATC TGCTGATATA CAGGTAGCGA CTAAACAGTT CAATTTGCTG
TTGGGAGATA GTATTGCCTA TCAGCCTTCC CCGGACAGTA TCCGGCTGGT GTACAACACG
GTGGCAGATA CCAGTTTCAG TCAGCTGCCG CAGATCAAAA CCCTGGAACA TGTGTCAGCC
GCTGCACAAT GGCGTTGGCG GACGGAGCGA TCAAAATTGT TACCGGACTT CTTTGTGGGA
TATAATAACC AGAGTATTAA TGGTCTGCAG AACGTGAATG GTCAGGAAGT ATTTTATGAT
AACAGCAAAC GTTTCAGTTA TGTGAATGCG GGTATTAATA TTCCCTTGTT CTTCGGTACA
CAGCGTTCCA GGGCAGCAGC TGCACAGATA GACTGGCAAC TGGCGCGTCA ACGGACAGAT
TATGCGCTTT TACAGACACA AACGGAATGG CAGAATGCAC AGACGCAGCT GCGGAAGTAT
GCGGCGAGTC TGCAATACTA CCAGACAAAA GGGCTGGAGA ATGCGGCGGC CATCATCACA
ACAGCCGATA AACAATTTGT AGGCGGAGAG ATCGACTATC TGCAATGGGT GATCCTGGTG
GACCAGGCCA TTGGTATCCG GAATGAATAT CTCGATATGC TGAACAACTA TAACCAGTCT
GTTATACAGG TACTGAAACT ACAAAATAGC TAA
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| Protein sequence | MLDKIIQFSV KNKLVIGLFM LLWIIYGIFE VTRLPIDAVP DITNNQVQII TTAPALGAQD
VERQITFPIE QAISNIPHLK ESRSMSRFGL SLISVVFEDD ADVYWARQQV TERLQQVEIT
ANARKPELAP VSTGLGEIYQ YVLRPEPGYE GKYNLADLRT IQDWLVRRQL LGTKGIADVS
TFGGELKQYE VAINPYQLKS LGLTINDVFT ALQTNNQNTG GAYIEKGPTV MYIRSEGLAG
SISDIENIVV KNTSAGVPVL IRHVASVRMG AATRYGALNY NNTGEVTGAI VMMLKGENSS
EVIQNVKQRI AEIQQTLPEG LRIEPFLDRT KMVNNAIGTV EHNLLEGALI VIFVLVIFLG
NLRAGLIVAS VIPLSMLFAI IMMNTFGVSG NLMSLGALDF GLIVDGAVII VEAILHHLHF
SKKYQHIDKL SQEEMNAEVA GSSSRMMNAA VFGQIIILIV YLPILSLQGI EGKMFKPMAQ
TVAFAIMGAF ILSLTYVPMV SALFISKKLT HKPNLSDRVM DKLERIYQKA LSRALRIRKT
LVAFAFGLFA LAILIFSRMG GEFIPQLEEG DFAVETRLLI GTNLSTTIAT FQQISGLLKS
KFPEVEKIVS RIGSAEIPTD PMPIEGGDMI IVLKDKSEWT SAKSFQEMAD KMSAVVQNAI
PGVTMGFQFP VQMRFNELMT GAKQDVVCKV FGEDLDQLAK YAEQIGNISK TVKGTADWYV
EKVTGMPQVV IRYNRNEIAK YGLNIDEINR TVNAAFAGAA AGQVYEGEKR FDLVVRVGNE
GRRNIEDVRN LMIATSTGNQ IPLYQVAAID EIEGPNQIQR ENAKRRITIG FNVRGRDVQS
IVEELQHKIN SKVKLEPGYT LTYGGAFENL QQAKKRLSIA VPVSLLLIFA MLYFAFSSVK
EGALIYTAIP LSAIGGVFAL AIRGMPFSIS AGVGFIALFG VAVLNGIVLI SEFNRIKSEG
RITDTLELVM QGTRNRLRPV LMTAAVASLG FLPMALSDGA GAEVQRPLAT VVIGGLLTAT
LLTLFVLPAL YLLFEGKKKV TVNKAVIIAG ILFLSIPVAK AQERPVGLQQ AINIAMQHNM
QAANARLNER AEGLRQKTGV DLPKTQLNAD YGKINSINND NRFGITQALS FPTVYGHQKK
ALKENYLAAQ AQTQLAEQDI RANVRRVFYD WVWLYEKQQL LQYADSIYHL FEEKATLRFK
TGETNILEQT TAVSHRQQIA NQLEMLSADI QVATKQFNLL LGDSIAYQPS PDSIRLVYNT
VADTSFSQLP QIKTLEHVSA AAQWRWRTER SKLLPDFFVG YNNQSINGLQ NVNGQEVFYD
NSKRFSYVNA GINIPLFFGT QRSRAAAAQI DWQLARQRTD YALLQTQTEW QNAQTQLRKY
AASLQYYQTK GLENAAAIIT TADKQFVGGE IDYLQWVILV DQAIGIRNEY LDMLNNYNQS
VIQVLKLQNS
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