| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2726 |
|---|
| Symbol | |
|---|
| ID | 8358887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 3335120 |
|---|
| End bp | 3335791 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644964906 |
|---|
| Product | uracil-DNA glycosylase |
|---|
| Protein accession | YP_003122406 |
|---|
| Protein GI | 256421753 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0692] Uracil DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGTTA AAATTGAACC CAGCTGGAAG GAGGTCCTCA AAGACGAATT TCACAAAGCC
TATTTCGAAC AAATTGTCAT GGCACTCAAG CATGAAAAAG CGGTAGGAAA TACTGTTTAT
CCTCCTGGAA ACCTGATTTT CAATGCATTC GAGCATACCC CCTTTGACAA GGTGAAGGTC
GTACTGCTGG GCCAGGACCC CTATCATGGT CCCAATCAGG CCCACGGATT ATGTTTTTCT
GTACAGGATG GTATCAAGCC CCCGCCATCT CTGGTGAACA TCTATAAGGA GATGAAAGAA
GATCTGGGCC TGCCGATCCC GCAGGGTGGT AACCTGACAA AGTGGGCTGA TAATGGGGTG
CTGCTACTCA ACGCAATGCT CACTGTACGG GCAAACGAGG CTGCTTCTCA CAGCAAAATA
GGTTGGGAGA GCTTCACGGA CTCCGTGATC CGGAAAGTGT CTGATTTGAA GGAAAATGTG
GTATTTATTC TTTGGGGACG TTTCGCACAG GATAAACAGG TCCTGATCGA CGCTACCAAA
CACCATATCC TGAAAGCAGC CCATCCCTCG CCTTTTAGTG CCGATAAAGG CTTTTTTGGA
TGTAAACACT TCTCCAAGAC GAATGAACTG CTGTCTAAGG CCGGTATTGA ACCGGTGGAC
TGGCGTTTAT AG
|
|---|
| Protein sequence | MEVKIEPSWK EVLKDEFHKA YFEQIVMALK HEKAVGNTVY PPGNLIFNAF EHTPFDKVKV
VLLGQDPYHG PNQAHGLCFS VQDGIKPPPS LVNIYKEMKE DLGLPIPQGG NLTKWADNGV
LLLNAMLTVR ANEAASHSKI GWESFTDSVI RKVSDLKENV VFILWGRFAQ DKQVLIDATK
HHILKAAHPS PFSADKGFFG CKHFSKTNEL LSKAGIEPVD WRL
|
|---|
| |