Gene Cpin_2711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2711 
Symbol 
ID8358871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3312287 
End bp3313375 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content52% 
IMG OID644964892 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_003122393 
Protein GI256421740 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGTTT CAGATCTATT TAAGCCGCTT ACGCTGTTGC ATGGTCCGGC CATGAGAAAT 
CGTTTCATGA TGGCGCCGCT TACCAATCAG CAAAGTGAGC ATGATGGCAC CGCATCCGAA
TTCGACCAAT TATGGATCGA ACAGCTTGCA AAAAGTGGCT ATGCACTGAT CCAGACCTGC
GCAGCCACAG TAGAAGCGGG AGGCATCGCA TTTGAACGCC AGTTAGGTAT TCACAGCGAT
GATCATTTAC CAGGTCTCAG GAGGATGGCC AGCAGCATTC GTGAAGGAGG CGGATTGTCA
GCGGTGCAGT TACACCATGC CGGGCATCGT GCCGACCCGT TATTAGGGGG AATCCCTTCA
CCTGCTTCCA GTGATACATT GCCAGGCATT AACGCGATCA CAACAGAAGC GGTAGAGCGC
ATTCGCGACA GTTTCATCAC GGCGGCAAAG AGAGCGCAAC TGGCGGGTTT CGATGGTATC
TCCGTACACG GTGCATTCGG ATGGATCCTT TCGGAATTCA TGTCTCCGGA TTTGAATAAC
CGTAAGGATA AATATGGCGG AAGTCTGGAA AACCGTGCAC GGTTCACGAT CGAAGTGATC
AAGGGCATTC GCCGGAGCTG CGGACCAGAC TTTCAGATTG GCTGGCGACT GTCAATCGAA
CGCTACGGAT TGCGTATGGA AGAATTGCGG GAAATCACCG GGGAGATCTT CGATCAAGAG
CTGATCGACT ATCTGGACCT GGCTTTGTGG GACTCTGCGC AGATTGTACG GGAAGGAAAG
TATAAAGGGA AGACTATGCT CAGCGTATTT ACTGAACTTC CCCGAAAGGG CGTGCGTCTG
GGGGCAGCCG GAAAAATCTA TAGTGCCCGG CGAGCAGGAG AATTGCTGGA TGAAGGTTGT
GATTTTGTGC TGATTGCACG GGCGGGTATT CTTCAACGGG ATTTTCCCCT TCAGGTGATG
GCCAATCCTC TTTATGATAG TCCTAAGCCA CCAGTACCGG CCGAATATCT TCGGAAAGGG
GGACTAAGCG AGCGGTTTAT CAGTTCATTG CGGGGATGGC AGACCTTCGT GAAGCCAGGA
TCTCCGTGA
 
Protein sequence
MSVSDLFKPL TLLHGPAMRN RFMMAPLTNQ QSEHDGTASE FDQLWIEQLA KSGYALIQTC 
AATVEAGGIA FERQLGIHSD DHLPGLRRMA SSIREGGGLS AVQLHHAGHR ADPLLGGIPS
PASSDTLPGI NAITTEAVER IRDSFITAAK RAQLAGFDGI SVHGAFGWIL SEFMSPDLNN
RKDKYGGSLE NRARFTIEVI KGIRRSCGPD FQIGWRLSIE RYGLRMEELR EITGEIFDQE
LIDYLDLALW DSAQIVREGK YKGKTMLSVF TELPRKGVRL GAAGKIYSAR RAGELLDEGC
DFVLIARAGI LQRDFPLQVM ANPLYDSPKP PVPAEYLRKG GLSERFISSL RGWQTFVKPG
SP