| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2707 |
|---|
| Symbol | |
|---|
| ID | 8358867 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 3310173 |
|---|
| End bp | 3310775 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644964889 |
|---|
| Product | NAD(P)H dehydrogenase (quinone) |
|---|
| Protein accession | YP_003122390 |
|---|
| Protein GI | 256421737 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1182] Acyl carrier protein phosphodiesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTA TCCTTCATCT GATTTCGAGT ATTCAGGGCA ATGAATCTTA CAGTTATAAA
CTCAGCAATG CAATTGTGAA TAAGGTTATC GAAAAGTACC CCGGCAGTAC AGTCGAAGAA
GTCAACCTGA ACAACCTGGA CATCCCGCAT CTGACGCCAT TGATCCTTCA GTCGATGTTT
ACACCGGCTG ATCAGTTGAC ACCAGAAGCC AAAGCGTCAA TACGCTATTC GGACGAGGCA
GTGAAACAAT TAATGGCAAC CGATATCCTC GTCATCGGTG CACCACTCTA TAATCTGACG
ATTCCTACTA CCTTAAAAGC ATGGGGCGAT CATATTACCA GGGCTGGCAT TACCTTCGGT
TATAGCGAAA ATGGACCGGT TGGAATGGTC AAAGGTAAAA AAGTGTATAT AGCGATGTCT
TCCGGGGGTG TTTATTCCGA AGGCCCTTCT AAACCTAATG ATTTCGTTGC GCCTTATCTG
AAAAGCTTCC TGGGACTTTT AGGGATGACT GACGTGACCG TTTTCCGGGT AGAAGGTGTC
AAACTTCCAG GGATTAAAGA ACATGCTCTG GAAAAAGGCA TTGCGAGCAT CCACATTGAT
TGA
|
|---|
| Protein sequence | MKRILHLISS IQGNESYSYK LSNAIVNKVI EKYPGSTVEE VNLNNLDIPH LTPLILQSMF
TPADQLTPEA KASIRYSDEA VKQLMATDIL VIGAPLYNLT IPTTLKAWGD HITRAGITFG
YSENGPVGMV KGKKVYIAMS SGGVYSEGPS KPNDFVAPYL KSFLGLLGMT DVTVFRVEGV
KLPGIKEHAL EKGIASIHID
|
|---|
| |