Gene Cpin_2695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2695 
Symbol 
ID8358855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3297675 
End bp3298709 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content46% 
IMG OID644964877 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003122378 
Protein GI256421725 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.448661 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAATG AATCTATTAG CGCTAATCAT ACCGGAACAA AGAAGAAAGT CGTAATCGTA 
GCCCTTACCG GACAAATGCT CATTGATTTT GCCGGTCCGT CAGATGTATT TACGAATGCG
GATAAATGCC TGCTGGAGCT GGGAAACAAA GAGGGGTATG ATATTTCAGT TGTCGCACCT
ACGCGTGACA GGAAGATTCG TACGACTACA GGCATGGAAA TTAATTTCCA GACCTGTGCG
ATGGACATTG ATACGCTGAT AGACACATTG ATCGTAGCCG GAGAAGATCA CCTGGAACCT
GTAGCCAGCG ATCTGGAACC ATTTTATCAG TGGCTCGCAG GAAAGAATGA GCATAATACG
CGTCGGATCG CCTCCGTATG TATCGGGGCT TTTGCCCTGG CGAAAGTTGG ATTACTGAAT
GGGCGGAAAG CCACGACACA CTGGTCAATG CTTGACCAGT TAAAGAAGGA GTATCCGCAG
ATAGAAGTCG ATCCGGACGC ATTTTTTACC CGGGACAGAA ATGTTTATTG TTCAGCGGGC
GTTTCATCAG GAATTGATCT CGCACTATCA CTCGTTGAAG AAGATTTCGG ACGGGATATT
GCCAACAGGG TTGCCAGACA GCTCGTGTTT TATCTGAACA GACCCGGTTC CCAGGCGCAG
TTTGGAAATC TATTGCCTGC ATATGAAGGA GCCAACATCG GAAAAAAATT ACAGGACTGG
CTTGAAGAAC ATCTGCATGA ACCAATAGAT GTAGGCAGAA TAGCCGATCA TTTTAATATG
AGTGTCCGTA ACCTTACACG GGTAGTGCAA AAACAAACGG GGATGCCCCC GGCGAAGTTT
ATAGAAAAGA TGAGGGTGGA AAAAGCCCGG AAATACCTGG AAGATACTGA CATGCCACTG
GAGAGGATCG CAGAACATTG TGGACTGGGC AATCTGGTAT CCATGCGTAG GATGTTCTTA
CGCCATCTGA TGACAACACC GTCTGATTAC CGGCGTGTTT TCCGTACTTC TTTAAATCGT
TCTAATCTAT ACTGA
 
Protein sequence
MINESISANH TGTKKKVVIV ALTGQMLIDF AGPSDVFTNA DKCLLELGNK EGYDISVVAP 
TRDRKIRTTT GMEINFQTCA MDIDTLIDTL IVAGEDHLEP VASDLEPFYQ WLAGKNEHNT
RRIASVCIGA FALAKVGLLN GRKATTHWSM LDQLKKEYPQ IEVDPDAFFT RDRNVYCSAG
VSSGIDLALS LVEEDFGRDI ANRVARQLVF YLNRPGSQAQ FGNLLPAYEG ANIGKKLQDW
LEEHLHEPID VGRIADHFNM SVRNLTRVVQ KQTGMPPAKF IEKMRVEKAR KYLEDTDMPL
ERIAEHCGLG NLVSMRRMFL RHLMTTPSDY RRVFRTSLNR SNLY