Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2695 |
Symbol | |
ID | 8358855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3297675 |
End bp | 3298709 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644964877 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003122378 |
Protein GI | 256421725 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.448661 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTAATG AATCTATTAG CGCTAATCAT ACCGGAACAA AGAAGAAAGT CGTAATCGTA GCCCTTACCG GACAAATGCT CATTGATTTT GCCGGTCCGT CAGATGTATT TACGAATGCG GATAAATGCC TGCTGGAGCT GGGAAACAAA GAGGGGTATG ATATTTCAGT TGTCGCACCT ACGCGTGACA GGAAGATTCG TACGACTACA GGCATGGAAA TTAATTTCCA GACCTGTGCG ATGGACATTG ATACGCTGAT AGACACATTG ATCGTAGCCG GAGAAGATCA CCTGGAACCT GTAGCCAGCG ATCTGGAACC ATTTTATCAG TGGCTCGCAG GAAAGAATGA GCATAATACG CGTCGGATCG CCTCCGTATG TATCGGGGCT TTTGCCCTGG CGAAAGTTGG ATTACTGAAT GGGCGGAAAG CCACGACACA CTGGTCAATG CTTGACCAGT TAAAGAAGGA GTATCCGCAG ATAGAAGTCG ATCCGGACGC ATTTTTTACC CGGGACAGAA ATGTTTATTG TTCAGCGGGC GTTTCATCAG GAATTGATCT CGCACTATCA CTCGTTGAAG AAGATTTCGG ACGGGATATT GCCAACAGGG TTGCCAGACA GCTCGTGTTT TATCTGAACA GACCCGGTTC CCAGGCGCAG TTTGGAAATC TATTGCCTGC ATATGAAGGA GCCAACATCG GAAAAAAATT ACAGGACTGG CTTGAAGAAC ATCTGCATGA ACCAATAGAT GTAGGCAGAA TAGCCGATCA TTTTAATATG AGTGTCCGTA ACCTTACACG GGTAGTGCAA AAACAAACGG GGATGCCCCC GGCGAAGTTT ATAGAAAAGA TGAGGGTGGA AAAAGCCCGG AAATACCTGG AAGATACTGA CATGCCACTG GAGAGGATCG CAGAACATTG TGGACTGGGC AATCTGGTAT CCATGCGTAG GATGTTCTTA CGCCATCTGA TGACAACACC GTCTGATTAC CGGCGTGTTT TCCGTACTTC TTTAAATCGT TCTAATCTAT ACTGA
|
Protein sequence | MINESISANH TGTKKKVVIV ALTGQMLIDF AGPSDVFTNA DKCLLELGNK EGYDISVVAP TRDRKIRTTT GMEINFQTCA MDIDTLIDTL IVAGEDHLEP VASDLEPFYQ WLAGKNEHNT RRIASVCIGA FALAKVGLLN GRKATTHWSM LDQLKKEYPQ IEVDPDAFFT RDRNVYCSAG VSSGIDLALS LVEEDFGRDI ANRVARQLVF YLNRPGSQAQ FGNLLPAYEG ANIGKKLQDW LEEHLHEPID VGRIADHFNM SVRNLTRVVQ KQTGMPPAKF IEKMRVEKAR KYLEDTDMPL ERIAEHCGLG NLVSMRRMFL RHLMTTPSDY RRVFRTSLNR SNLY
|
| |