| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2670 |
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| Symbol | |
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| ID | 8358830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3262938 |
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| End bp | 3264392 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644964852 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003122353 |
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| Protein GI | 256421700 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0022001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGAAAGC TTATATATAT CACCATCATG GTTTCCTTTA TTGCCTGCAA GGATAGTTTC
CTGGAGGTAG TTCCGCTGGG ATCACAGGTA GCAGTAACAA CAGACGACTA TGATAAACTG
ATGAATGATC CGGCATATTA TCTTCAGTCA TTTGCAGGCG GCTGGCAGGA ACAAACCCTC
ATGGAAGATG ATATTGATGC AGAGGAAGTT TATCTCTTAC AGGGTAGTCA GCAGATGCTG
CGACTCTTTC AGTGGCAAGA TGTCATTTAC CAGCAACAGG ATCAGGCGCC GTGGGCGGTA
ACGCTCTGGC TGGAGCAGTT ATATTCCCTG AACAAGATTA TCAACGAAGT GATGGTTTCC
AGCGGAGGCT CCAATGAGCA GAAAAGATCT ATTCGTGCAC AGGCGCTGGC AACCCGTGCA
TGGACCTATT TCCAGTTCAT CAACTTCTAT GGCAAACCTT ATGTTGAAAG CACTGCTGGA
AATGATCCGG GCTTTCCTAT CATAGAACAG GCAGATGTGA GTATGACCGG CTTCACACGC
GCATCTGTAC AGTCAGTGTA CGATTTCATT ATTAAAGATC TCAATGCGGC TATTGCAGAC
TTACCGGTAA AACCGCTGAT ACAGACCAGG ATGTCCCGGC CTGCTGCTGA AGGATTACTG
GGCAAAGTAT ATCTGTATAT GGGACGGAAT GATGATGCAT TAAAAACGTT CAATGCTGCA
TTTACTGATC TGGCGGGCAG CGATAGCCAT TTGTATGATT ATAATCAGAC ACTGGCTCCA
GGTGGCGCTT TTCTACCTGT AGATATGATG ATCGGACCCT CTCAGGGGCC GGGCAATAAC
CAGAACGACC TCACGGAAGC GGTGATATCG AAAGTATTCT ACAACGGACC TTACAGTGGT
AATCAGCTCG GGAATAATGG TCTGGTACTG GCGCCATGGG CAGCGGCATT GTATGGTGCA
TCAGACCTGC GGCTGCAGTT ATATACCAAC ACCAATCCTG ATCTGTCGCC CAATACCGGC
GGCCGTCTCC GGAAATATGG CGTACAATAT GCAAGAATGG GCCTGCAATT ACCTGACCTT
TATCTGCTTC GCGCAGAATG TAAGGCACGT CTGAATGATC TGCAGGGGGC AGTGGCTGAT
ATAGAAACCC TTCGCAAAAA CCGTATGCCT GCTGCCGACG CTACTATTCC GGCTAGCATC
GCAGGTAACC AAACGGCGCT GATCCGTTTC ATATTTGACG AGCGCGTCCG TGAGTTTGCT
GCTGAAGGCT ATCGGTGGTT TGATATGCGA AGACAGTCTG TAGATCCCCT GTTCGCCGGT
CAGGTATTCA CACATACACT CCATAAGGCA GATGGTACAG CAGCTACCTA TACACTAAAG
CAACCCAACC GCCTTGTGCT ACAGTTGCCG CCCACATTAG TTAATGCTAA TCCGGGTATA
CCAAACAATC CTTAA
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| Protein sequence | MRKLIYITIM VSFIACKDSF LEVVPLGSQV AVTTDDYDKL MNDPAYYLQS FAGGWQEQTL
MEDDIDAEEV YLLQGSQQML RLFQWQDVIY QQQDQAPWAV TLWLEQLYSL NKIINEVMVS
SGGSNEQKRS IRAQALATRA WTYFQFINFY GKPYVESTAG NDPGFPIIEQ ADVSMTGFTR
ASVQSVYDFI IKDLNAAIAD LPVKPLIQTR MSRPAAEGLL GKVYLYMGRN DDALKTFNAA
FTDLAGSDSH LYDYNQTLAP GGAFLPVDMM IGPSQGPGNN QNDLTEAVIS KVFYNGPYSG
NQLGNNGLVL APWAAALYGA SDLRLQLYTN TNPDLSPNTG GRLRKYGVQY ARMGLQLPDL
YLLRAECKAR LNDLQGAVAD IETLRKNRMP AADATIPASI AGNQTALIRF IFDERVREFA
AEGYRWFDMR RQSVDPLFAG QVFTHTLHKA DGTAATYTLK QPNRLVLQLP PTLVNANPGI
PNNP
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