Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2663 |
Symbol | |
ID | 8358823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3251542 |
End bp | 3252600 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644964845 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_003122346 |
Protein GI | 256421693 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAACCA GATATATTAC CATTATTGCC ATCATAGCGA TCGTTGCACT GATCGTGTTT AAGCTGGCCG CTAATAAGCG CAAACTGAAT GAAAAGAATA ATCCGGCCCC GGTTGCCGCT GTACGTATTC CTGTAAAAGT CGCAGCAGCT GCAGAGCAGG TATTGGAGAT CAATATTCTC AAAACGGGTA ACCTCGCCCC GTTTAAAGAA GCAAAAGCCC TGGCTATGTC AGGTGGTACG CTATTAAAAG TAAACTTCGA CCTGGGCGAT AAGGTAAAAC AGGGACAGGT ACTGGCAGTG ACAGATACCC GCCTCGCGCA ACTGGAATTG CAGAAGGCAG AAACGAACGC CGCCAAACTG AAGAATGACC TGAATGTATA CACCGAACTC CTGGCTGGTA AGGCCGCTAC ACAGGAGAAA GTTAACGGTA TCAGACAGGA CTATGAAAAT GCCGTTAACC AGGTACAGCA GGCAAGAAAG AATATTTCAG ATGCCGCTAT TCTGGCGCCT ACAGGCGGTG TGATCGCTGC CAAGAAAGTA GAACAGGGCA TGTTTGTAAA TGCGGGTACG GAGATCGCCT CCATTGTTAA TCTTTCCCGT GCAAAAGTAC AGGTGAATCT TACGGAAGCC GAAGTATATA AAGTGAAGGA AGGACAACCC GTGAAGATCA GCACAGACGT CTATCCCGGT AAAACATTCA GTGGTACGAT CAGCTTTATA AGTCCGCAGG CAGATGAAAC GCACAACTAC CTCGTAGAGA TCCTTATCGG AAACGACAAC GAAACCCTGC TCAGATCAGG CACATTTGTA TACGTTGATT TCTCCCGGAA GACAGAACAG CAGGTACTGG TCATCCCCAG AGAAGCACTG ACAGAGAGCG TGAAAGACGC TGCCGTATAC GTATTGCAGG ATAGCGTGGT ACACCAGCGT AAAATACAGA CGGGCGCTGA TGTGAACGGC ATGGTACAGG TGCTCGGTGG ATTGAAACCA GGAGAACAGG TGGTGACCTC CGGTCAGATT AATTTAAAGG ATGGCAGTGT TGTCAGTGTC TCCAAATAA
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Protein sequence | MRTRYITIIA IIAIVALIVF KLAANKRKLN EKNNPAPVAA VRIPVKVAAA AEQVLEINIL KTGNLAPFKE AKALAMSGGT LLKVNFDLGD KVKQGQVLAV TDTRLAQLEL QKAETNAAKL KNDLNVYTEL LAGKAATQEK VNGIRQDYEN AVNQVQQARK NISDAAILAP TGGVIAAKKV EQGMFVNAGT EIASIVNLSR AKVQVNLTEA EVYKVKEGQP VKISTDVYPG KTFSGTISFI SPQADETHNY LVEILIGNDN ETLLRSGTFV YVDFSRKTEQ QVLVIPREAL TESVKDAAVY VLQDSVVHQR KIQTGADVNG MVQVLGGLKP GEQVVTSGQI NLKDGSVVSV SK
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