Gene Cpin_2608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2608 
Symbol 
ID8358768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3196153 
End bp3196713 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content50% 
IMG OID644964791 
Productprotein of unknown function DUF395 YeeE/YedE 
Protein accessionYP_003122292 
Protein GI256421639 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.104048 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATGC TCAGATATCT TAGTCAGCCG TGGCCCTGGT ATATTGCAGG ACCTGCAATT 
ACCGCCGTCA TGCTGTCGCT GCTCTATTCG GGGAAGACTT TCGGATTTTC ATCCAATCTC
CGTACCATAT GCTCCATCGC CGGGGCAGGC ACAAAAGTGC CCTTTTTTCA ATTCGATTAC
AAAAAACAGT ACTGGAACCT GCTTTTTCTC CTGGGCGCCA TAATAGGTGG TTTTATCAGC
CGATGGCTCA TGAACTCTGG CCAGTTGCAA TTATCTGGTG AAGCTATTCG GGACCTTCAG
GCACTGGGGA TATCCTTTGA CGGACAGTTA CTACCAACGG CATTATTCGG CACACAAGCC
CTACTGTCGT TCAAGGGGTG GATCATGCTG GCCGGTGGAG GTTTCCTCGT CGGTTTTGGC
TCCCGTTATG CCGGCGGCTG TACTTCCGGG CATGCCATCA GCGGATTATC CAATCTGCAA
TGGCCGTCTC TCATTGCCGT TATGGGGTTC TTTGCCGGCG GACTTATCAT GACACATCTA
TTTTTTCCAT TAATCTTTTA A
 
Protein sequence
MTMLRYLSQP WPWYIAGPAI TAVMLSLLYS GKTFGFSSNL RTICSIAGAG TKVPFFQFDY 
KKQYWNLLFL LGAIIGGFIS RWLMNSGQLQ LSGEAIRDLQ ALGISFDGQL LPTALFGTQA
LLSFKGWIML AGGGFLVGFG SRYAGGCTSG HAISGLSNLQ WPSLIAVMGF FAGGLIMTHL
FFPLIF