Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2601 |
Symbol | |
ID | 8358761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3187541 |
End bp | 3188440 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644964784 |
Product | glycerophosphoryl diester phosphodiesterase |
Protein accession | YP_003122285 |
Protein GI | 256421632 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.168335 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGTA CCATTCTTTT ACCATTAGCA GCTGTATTAT TCACAGCAAA TGTTTGCGCA CAACAGAAAA CTGATGTGCA GGCCCACCGC GGAGGCAGAG GATTAATGCC TGAAAATACC ATTCCCGCTA TGTTACACGC CATTGACCTG GGAGTAAGAA CCCTGGAACT GGACTGTGTA ATCTCTTCAG ATAAAAAAGT AGTCGTGTCG CATGATGTGT TCATGTCGTC TGAGTTTATC CGGAAACCTG ATGGTTCGGA TATTCAGAAG GAAGAGGAGA AGCAGTATGC GTTATATACC ATGACTTACG ACAGTATCCG TAAGTTTGAT GTAGGCGCTA AACCTTATGC GAAATTCCCT GAACAGGTAA AGATAAAGGC ATATAAGCCT TTGTTGTCTG ATCTGATTGA TAGTGTAGAA ACATATATTA AAAAGCATCA CCTGAAACCG GTGAACTATA ACATTGAAAC AAAATGTTCT CCGGACGGGG ATGATAAATT TCATCCTAAA CCGGATGTGT TTGCAGGTCT GGTGATGGAT GTGATAAAGA AAAAGAAAAT TGCAGACAAA GTGACGATAC AGTCTTTTGA TCCGCGTACG CTCCAGGTGA TCCACAAAAC GGATCCTAAA CAGGTACTGG CATTCCTTGT GATGAACAAA TATAGCCTGA CGGATAACCT GCAGAAACTA GGATTCACGC CTGCGATCTA CAGTCCGTAT TACCTGATGG TAACACCTGA ACTGGTAAAG GAAGCACATG AAAAGAAGGT AAAAGTATTA CCCTGGACGG TGAACGAACC GGCTGAGATG GAGAAGATGA TGTCAATGGA AGTGGATGGT ATCATTACCG ATTACCCGGA CAGACTGATA AAGATAGCAG GCCGCTATCA ACAGCAATAA
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Protein sequence | MKRTILLPLA AVLFTANVCA QQKTDVQAHR GGRGLMPENT IPAMLHAIDL GVRTLELDCV ISSDKKVVVS HDVFMSSEFI RKPDGSDIQK EEEKQYALYT MTYDSIRKFD VGAKPYAKFP EQVKIKAYKP LLSDLIDSVE TYIKKHHLKP VNYNIETKCS PDGDDKFHPK PDVFAGLVMD VIKKKKIADK VTIQSFDPRT LQVIHKTDPK QVLAFLVMNK YSLTDNLQKL GFTPAIYSPY YLMVTPELVK EAHEKKVKVL PWTVNEPAEM EKMMSMEVDG IITDYPDRLI KIAGRYQQQ
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