Gene Cpin_2601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2601 
Symbol 
ID8358761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3187541 
End bp3188440 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content43% 
IMG OID644964784 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_003122285 
Protein GI256421632 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.168335 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTA CCATTCTTTT ACCATTAGCA GCTGTATTAT TCACAGCAAA TGTTTGCGCA 
CAACAGAAAA CTGATGTGCA GGCCCACCGC GGAGGCAGAG GATTAATGCC TGAAAATACC
ATTCCCGCTA TGTTACACGC CATTGACCTG GGAGTAAGAA CCCTGGAACT GGACTGTGTA
ATCTCTTCAG ATAAAAAAGT AGTCGTGTCG CATGATGTGT TCATGTCGTC TGAGTTTATC
CGGAAACCTG ATGGTTCGGA TATTCAGAAG GAAGAGGAGA AGCAGTATGC GTTATATACC
ATGACTTACG ACAGTATCCG TAAGTTTGAT GTAGGCGCTA AACCTTATGC GAAATTCCCT
GAACAGGTAA AGATAAAGGC ATATAAGCCT TTGTTGTCTG ATCTGATTGA TAGTGTAGAA
ACATATATTA AAAAGCATCA CCTGAAACCG GTGAACTATA ACATTGAAAC AAAATGTTCT
CCGGACGGGG ATGATAAATT TCATCCTAAA CCGGATGTGT TTGCAGGTCT GGTGATGGAT
GTGATAAAGA AAAAGAAAAT TGCAGACAAA GTGACGATAC AGTCTTTTGA TCCGCGTACG
CTCCAGGTGA TCCACAAAAC GGATCCTAAA CAGGTACTGG CATTCCTTGT GATGAACAAA
TATAGCCTGA CGGATAACCT GCAGAAACTA GGATTCACGC CTGCGATCTA CAGTCCGTAT
TACCTGATGG TAACACCTGA ACTGGTAAAG GAAGCACATG AAAAGAAGGT AAAAGTATTA
CCCTGGACGG TGAACGAACC GGCTGAGATG GAGAAGATGA TGTCAATGGA AGTGGATGGT
ATCATTACCG ATTACCCGGA CAGACTGATA AAGATAGCAG GCCGCTATCA ACAGCAATAA
 
Protein sequence
MKRTILLPLA AVLFTANVCA QQKTDVQAHR GGRGLMPENT IPAMLHAIDL GVRTLELDCV 
ISSDKKVVVS HDVFMSSEFI RKPDGSDIQK EEEKQYALYT MTYDSIRKFD VGAKPYAKFP
EQVKIKAYKP LLSDLIDSVE TYIKKHHLKP VNYNIETKCS PDGDDKFHPK PDVFAGLVMD
VIKKKKIADK VTIQSFDPRT LQVIHKTDPK QVLAFLVMNK YSLTDNLQKL GFTPAIYSPY
YLMVTPELVK EAHEKKVKVL PWTVNEPAEM EKMMSMEVDG IITDYPDRLI KIAGRYQQQ