Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2599 |
Symbol | |
ID | 8358759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3185331 |
End bp | 3186251 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644964782 |
Product | cytochrome c family protein |
Protein accession | YP_003122283 |
Protein GI | 256421630 |
COG category | [C] Energy production and conversion |
COG ID | [COG3258] Cytochrome c |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.349522 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.253602 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACTTTC GTATACCGTT ACTGTCCGGC TACATCGTAG CAGGTGTTAT AGCCATGTCT GTCTCCTGTA AAAGGGTGGA GCACGTCTGG ACAGCGCCTG ATACCGCCAG TATTCCGCAT AATACATCCG GAGATCTGAT CCGGTATGGA AGGGATCTGA TTGTGCATAC CGCTGTCTAT CTGGGCCCTG GTGGCAAGGT AGCCGCTATC AGCAACGGGA TGAACTGCCA GAATTGTCAC CTGGAAGCGG GGACGAAATT CATGGGAAAT AATTATGCGG CAACAGCGGC CAACTATCCC CGTTACCGCG ATAGGAGCGG AACGATTGAA TCGCTGGATA AGCGTATAAA CGATTGTCTT ATCAGAAGTC TGAACGGCTC ACCGCTTGAT AGAAAGAGTC GTGAGATGCA GGCAATGATC GCCTATATCG AATGGGTTGG AATGACAGTG AATAATGGCG CTAAGCCGCC CGGCAGTGGT ATCAGAGAGC TGCCCTATTT ACTTCGGGCG GCTGATACGT CAAAAGGGAG ACTGGTATTT GAAAGTAAAT GCCGGGAATG TCATGGTGCA GATGGAATGG GAAAGTATGA TCCGCTGACA AAAGAATATG TTTACCCTCC ATTGTGGGGA CCGCGTAGTT ATAATAACGG TGCCGGTATC TTCAGACTGT CAAAATTTGC CGGATATATC AAAGCTAATA TGCCATTGAA CAATGCACAT CTGACAGATG AAGAAGCCTG GGATGTAGCA GCGTTTGTAA ATTCCCAACC GAGAACGGAG AAATTGTTTG AGAAGGATTG GCCTGATCTG AACACAAAAC CCCCTGATGT TGCAACAGTA CCGTTTGCGG ATACGTTTTC TGCTATGCAG CATAAGTATG GTCCATTTGG GGTGATTGTG AAAAGCAGGA AGAAGCACTA A
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Protein sequence | MYFRIPLLSG YIVAGVIAMS VSCKRVEHVW TAPDTASIPH NTSGDLIRYG RDLIVHTAVY LGPGGKVAAI SNGMNCQNCH LEAGTKFMGN NYAATAANYP RYRDRSGTIE SLDKRINDCL IRSLNGSPLD RKSREMQAMI AYIEWVGMTV NNGAKPPGSG IRELPYLLRA ADTSKGRLVF ESKCRECHGA DGMGKYDPLT KEYVYPPLWG PRSYNNGAGI FRLSKFAGYI KANMPLNNAH LTDEEAWDVA AFVNSQPRTE KLFEKDWPDL NTKPPDVATV PFADTFSAMQ HKYGPFGVIV KSRKKH
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