| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2584 |
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| Symbol | |
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| ID | 8358744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3165893 |
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| End bp | 3167293 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644964767 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003122268 |
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| Protein GI | 256421615 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0423133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00978547 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCAAACAA AAAGAATCGT CGTAGTCCTT TTCCTGCTGT TATGGCACGG ATCGATGGAG
GCGCTACACG CACAGCAGGT ACTGACGTTG AAAGAAGCAG TACAGACCGC GCTGGCCAAC
TATGGGACCG TCAAGGCTAA AGCCAATTAC CTGAGCGCGT CCAAAGCTAC AGCCACACAG
GCAAAGCGGG ATTATCTACC AAACCTGAAC GTATCCGCCC AGCAGGATTA CGGTACCGTC
AACGGGCAAT TCGGGCCGTC TTATGGTCTG AATGGTTTAG GGGTAGCCTC TTCGGGTCCT
ACCCTTCCTT CACAGAACTG GAACGCGGCA TTCGGCGGAC TTTATCTCGC CAACCTGAAC
TGGGATTTCT TTGCTTTCGG CCGTGCCAAG GAGAGGATCA AAGCAGCACA GGCAGCGGTA
AACAGAGACC AGTCAGACTG GGAACAGGAA CAGTTTCAGC ATTCCGTAAG GGTGGCAGGT
GCTTATCTGA ACCTGCTGGC AGCACAACGT CTTACCCGTT CCTGGTGGAA CAACCTGGAA
CGTGCGGATA CTTTCCGCTC AGTGGTGGTA ACAAGAGCAC TGAATGGACT GATTCCAGGC
GTAGACTCTA CCCTGGCCAA TGCAGAGGTA TCCAATGCAA AGATCGCCTA TACCAAGGCG
AAAGATGCGG AGCAGACCTA TTCCAATCAG CTGGCACAAC TGATGGGCGT ACCGCCGATC
AATTTCGTAC TGGACACCTT ATTTATCGCA CGTATACCAG GTGCACTGTC TGACAGCGTC
AGCGCAAATA TCCAGGGGCA TCCGTTACTG AAGTTCTACG AGAACCGTAT TAAGGTCAGC
GACGAACAGG CCCGTTATAT CCATACGCTG AACTATCCTG CTTTCTCTGT ATTCAGCGCA
ATACAGACGA GAGGCTCCGG ATTTGACGCG AACTATATTA CTGACCAGAC GGCTTATAAT
AAGGGCTACT GGGATGGTGT TAAACCTAAC CGCAGTAACT ATCTGGTAGG TATAGGCGTC
ACATGGAACC TGACCTCTCC GCTGAGAGTG AAACACCAGA CGGCCTCTCA GAAATATGTA
TCTAAAGGTC TCCAGGATGA ATATGAGCTG GTACGTCAGC AACTGACAGC ACAGTTAATA
CTGTCAGACA CCCGGATCAA AAATGCACTC GACAACTACG CCGAAGCGCC GATACAGGTG
AATGCAGCAA CAGAAGCTTA CAACCAGAGA ACAGTATTAT ACCGGAACGG ACTGAATACC
ATTGTGGACG TAACACAGGT ATTCTATACC CTGAACCGTG CAGAGACAGA CCGTGATATT
GCCTACACTA ATGTATGGCA GGCACTGTTG CTGAAAGCAG CTGCGAGTGG CAATTTTTCT
CTATTCATCA ATGAATTCTA A
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| Protein sequence | MQTKRIVVVL FLLLWHGSME ALHAQQVLTL KEAVQTALAN YGTVKAKANY LSASKATATQ
AKRDYLPNLN VSAQQDYGTV NGQFGPSYGL NGLGVASSGP TLPSQNWNAA FGGLYLANLN
WDFFAFGRAK ERIKAAQAAV NRDQSDWEQE QFQHSVRVAG AYLNLLAAQR LTRSWWNNLE
RADTFRSVVV TRALNGLIPG VDSTLANAEV SNAKIAYTKA KDAEQTYSNQ LAQLMGVPPI
NFVLDTLFIA RIPGALSDSV SANIQGHPLL KFYENRIKVS DEQARYIHTL NYPAFSVFSA
IQTRGSGFDA NYITDQTAYN KGYWDGVKPN RSNYLVGIGV TWNLTSPLRV KHQTASQKYV
SKGLQDEYEL VRQQLTAQLI LSDTRIKNAL DNYAEAPIQV NAATEAYNQR TVLYRNGLNT
IVDVTQVFYT LNRAETDRDI AYTNVWQALL LKAAASGNFS LFINEF
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