| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2573 |
|---|
| Symbol | |
|---|
| ID | 8358733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 3145543 |
|---|
| End bp | 3148170 |
|---|
| Gene Length | 2628 bp |
|---|
| Protein Length | 875 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644964756 |
|---|
| Product | malto-oligosyltrehalose synthase |
|---|
| Protein accession | YP_003122257 |
|---|
| Protein GI | 256421604 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3280] Maltooligosyl trehalose synthase |
|---|
| TIGRFAM ID | [TIGR02401] malto-oligosyltrehalose synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAT ATAATCCACC TTCTTCTACT TATCGTCTGC AATTGCATGG CGGATTTACA
TTTGCCGATC TGAAAGATAT CCTGGACTAT CTCGATAAAT TAGGGATTTC CACCGCGTAC
GCCTCTCCTA TTTTCACGGC TTCACCGGGC AGTATGCATG GATATGACGT CACTGAGCCA
CATGCGATCA ACCCTGCTAT TGGCAACATT GAACAGCTGC GGGAGATAAA AAAAATACTG
CAGGAAAAGG GAATGAACTG GCTACAGGAC ATCGTACCTA ACCATATGGC TTTTCACATG
AGCAATCATC GGTTGTATGA TGTGATGGAA CGGGGGCCTT TGTCGCCTTA CTACGAATAT
TTTGATATCG ATTGGCAGCA CCCCTCCCCT GAACTGGCAG GTAAACTGAT GACACCTTTT
CTGGGGAAAA GTATGGAAGA TTGTGTTGAG GAAGGGGAAA TCAAACTGGC GTATACAGAT
AAGGGATTAG AGATCAATTA CTTTGAACAG ACTTTCCCTT TGTCTATCTC CGCATATGAA
GTATTACAAT CCGTATTAAA GGATAGTGAT GCCCTGCCGG TACTTGGATT GTTTGATGAT
TTGTATCAAC AGGCCACGAA AGGGATTGCC CTGAAAGATT GGGTACAGGT AAAGCGGGAA
TTGTATAATA CGGCTAACCG GTCGGTGCTG GAAGGTATTG CAACGCGGAT CAGTAATGAT
AAATCTGTCT TACTGCAGTT GATGCGGCAA CAATATTATC ATCTTTCCGG CTGGCAGGAG
GCAGATCGCC AGATCAACTA CCGACGTTTC TTTACGGTGA ATGAGCTGAT TACGCTAAGT
ATGGAATCAC AGACTGTGTT TGATGAGTAC CATACCTTTC TGCATAGTCT GTACCGGGAG
GAACTGATAC AGGGATTACG TATCGATCAT ATCGATGGTT TGCGCGACCC CGCGACTTAT
ATACAACGCC TGCGGATGTT GTTTGGAAGT AGTTGTTACA TTATTGCAGA GAAGATCCTG
GAGCACGAAG AAGTCCTGCC TCCGGACTGG GCATTGCAGG GTACGAGTGG TTATGAGTTT
CTTGCTTTTA CTAATCATCT GCTGACGAGT AAGGATGGAG AAAAACAACT GACCACCTGG
TATCAGGAGT TACTACCTGA GCAGTCAGCT TACCAGGACA TCGTGTATGA GAAGAAAAGG
CTGATTTTAG AGCGATACAT GGGCGGAGAA TGGGAGAATC TCATTCGCTA CTGTTATGCG
CTTAAACTGG CCGATGCGCG TACTAACCGC GAACAGCTGA AGGAAGCCAT TGCGTTATTT
ATTATTTGTT TGCCGGTATA CCGGCTCTAT CCCGGACAGT TTCCCATCGA TGATTACTCC
CGGGAAATTA TTCAAAGCAC GTTTGTCCGC ATACGGGCGA TGAATCGCCG TGCAGAAACT
GAGATTGGCT TGCTGGAAGC TTTATGGGAA GAAATTCCTG ATGCGGAGAG AGCCCGTAAC
CGGTTGTTGT TCCTCCAGCG GCTGATGCAG TTTACCGGTC CGGTGACGGC TAAAGGAGTT
GAAGACACTA CTTTCTATAT ATACAATGCA TTGCTTTCAC ATAATGAGGT GGGCGATAGT
CCGGCGATAG CTGACTTTTC CATCAATACC TTCCACCAGC GTTTAGCCGC CCGTCAGCAA
CATACCCCTG CCTCTCTGAA TACCACTTCC ACCCATGATA CTAAACGCGG AGAAGATGGT
CGTATGCGAC TGAATATGTT ATCACTGCAC CCTTCTCTAT GGAAAGAACA GATAACGCAA
TGGCGGGAGC AATTTCAGCC TGGTGATCTG ACACTGAATG ATGAATATTT TATTTACCAG
TCGGTCATTT CAGGTTTTCC TGTCGATGGG GTTGTCAATG CCGAATATAT TGAACGTTTG
CAACAGTATC TGATTAAAGC CCTGCGGGAG GCGAAAGTAA ATACGGCGTG GTCAGCTCCA
AAAGAAGCAT ACGAAAAACA TGCTACTACC TTCGTACAAC GCCTGCTGAC AGATGAAGGT
TTTCTAAGCA GTGTGCGCCG TTTTATTGAC ATCATCGATG AACAGGCATT TGCAGCAACG
CTTGCGCAGG TGTTGATTAA AATCACTGCC CCGGGTATTC CGGATATTTA CCAGGGCTGT
GAGCTGTGGG ATTATAGTTA TGTGGATCCG GATAACCGTC GTCCTGTGAA TTATAATATG
CGGCGGCAGT ACCTGGAAAA TATTATTTCC CGGGAACAAC AGCCTGACTT CTTTCAATAT
CTTTCTCAGA ATAGGCGGAT GGGGCTGGAA AAATTGTTTG TCACCTGGAA GACTTTAAAT
TTCCGGCGGA AGTATGCTGA GCTTTTCCTG GATGGTGATT ATCTGCCTTT ACAGACGAAT
AGCGAGCAGA TTGTGGCATA TGCCCGGGTA TACAGACAGG ATTGGGTAAT TGTCATTGTG
CCGCTGTTTG GCGAGATTGG TGTGGATGCA GCGGTATTAT TGCCGGCAGG CGCACCGGGG
AAATGGGAAA ATATTTTTAC GGGGGAAATG GTGAATGGTG GCGGACAGAT AAGGGTTGCG
GAGGTGTTTG AGAAGTTTAG GCTGGGGTTG TTGAAGGCAG ATTTTTAA
|
|---|
| Protein sequence | MKSYNPPSST YRLQLHGGFT FADLKDILDY LDKLGISTAY ASPIFTASPG SMHGYDVTEP
HAINPAIGNI EQLREIKKIL QEKGMNWLQD IVPNHMAFHM SNHRLYDVME RGPLSPYYEY
FDIDWQHPSP ELAGKLMTPF LGKSMEDCVE EGEIKLAYTD KGLEINYFEQ TFPLSISAYE
VLQSVLKDSD ALPVLGLFDD LYQQATKGIA LKDWVQVKRE LYNTANRSVL EGIATRISND
KSVLLQLMRQ QYYHLSGWQE ADRQINYRRF FTVNELITLS MESQTVFDEY HTFLHSLYRE
ELIQGLRIDH IDGLRDPATY IQRLRMLFGS SCYIIAEKIL EHEEVLPPDW ALQGTSGYEF
LAFTNHLLTS KDGEKQLTTW YQELLPEQSA YQDIVYEKKR LILERYMGGE WENLIRYCYA
LKLADARTNR EQLKEAIALF IICLPVYRLY PGQFPIDDYS REIIQSTFVR IRAMNRRAET
EIGLLEALWE EIPDAERARN RLLFLQRLMQ FTGPVTAKGV EDTTFYIYNA LLSHNEVGDS
PAIADFSINT FHQRLAARQQ HTPASLNTTS THDTKRGEDG RMRLNMLSLH PSLWKEQITQ
WREQFQPGDL TLNDEYFIYQ SVISGFPVDG VVNAEYIERL QQYLIKALRE AKVNTAWSAP
KEAYEKHATT FVQRLLTDEG FLSSVRRFID IIDEQAFAAT LAQVLIKITA PGIPDIYQGC
ELWDYSYVDP DNRRPVNYNM RRQYLENIIS REQQPDFFQY LSQNRRMGLE KLFVTWKTLN
FRRKYAELFL DGDYLPLQTN SEQIVAYARV YRQDWVIVIV PLFGEIGVDA AVLLPAGAPG
KWENIFTGEM VNGGGQIRVA EVFEKFRLGL LKADF
|
|---|
| |