Gene Cpin_2556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2556 
Symbol 
ID8358715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3126201 
End bp3126518 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content47% 
IMG OID644964738 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_003122240 
Protein GI256421587 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAC GAGAAAGAAA GAGCTACGAT AAGGCCTTCA AATTGATGGC AGTAGAATTG 
TACCGGACAG GCAAGCCAGC CGGGACAGTA GCTAAAGAAT TAGGTATCGG CGTTGACATG
CTTCGTCGCT GGGCCAGAGA GCACAGTGAA ACCGGAAACC GTAGCTTTCC CGGGAATGGG
AAACAGGATT TGACCCCAGA ACAGAAGGAA ATCCAGATGC TGAGGAAAGC CCTTCAAGAA
TCAGAATTAG AGAACCGGAT CTTAAAAAAG GCAGTCAGCA TCTTCTCCAG GGACGACAAC
AAATATTCAG GTTCATAA
 
Protein sequence
MSKRERKSYD KAFKLMAVEL YRTGKPAGTV AKELGIGVDM LRRWAREHSE TGNRSFPGNG 
KQDLTPEQKE IQMLRKALQE SELENRILKK AVSIFSRDDN KYSGS