Gene Cpin_2490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2490 
Symbol 
ID8358648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3065750 
End bp3066715 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content48% 
IMG OID644964676 
Producthypothetical protein 
Protein accessionYP_003122179 
Protein GI256421526 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGTA GATCTTTAAA GCAGGACAAA TGGCCTGTAT TGAAATTTGA CGACTTGAAA 
GGTACATTGG CAGCCGTACA TCTGTGGACA CAGGTCGTAG GGAAGATCCG TCTCAGGAAG
ATGCCCTGGT TAAATCACTC CTGGCACGTA ACCCTGTATG TTACTGCCAA TGGATTGAGT
TCCGGCAGTA TGCCTTATGA ACATGGAATT TTTCAGATGG ATTTTGATTT TCACCGACAC
CAGCTGGTGA TTACGGCAAG CACAGGCGGA AGAGATACGG TAGACCTGGC CCCCGGAACA
GTGGCTGGCT TTTATAATGC CGTTATCACA AAATTGAAAG CCCTGGATAT CCACACCGCT
ATATATACAA CCCCCAGCGA ACTGGAAGGC GCTATTCCTT TTGAGGAGGA TCATGCACAG
CGCCCATATG ATCCGCAACA AATGGAAGAT TACTGGCAGG CCCTTGTAAG AGTGCATAAT
GTATTGACAC GGTTCAGGTC CGGATTTACA GGCAAAAACA GCCCGGTTCA TTTCTTCTGG
GGTGCTTTTG ATCTGGCGGT TACCCGCTTT TCCGGCAGAG ATGCCCCTTT GCACCAGGGA
TCTGCTCCTA ACATGCCGGC AGCGGTTATG CAGGAATCTT ATTCAAAGGA AGTAAGCTCC
TGCGGATTCT GGCCAGGCAG TGAACAATAT CCACACGTTG CTTTCTATTC TTATTGTTAT
CCGGGGAATG AGGCTTTTGG TCAGCAGCCT GTTCAGCCTG AAGCCGCTTT TTATAGTAAT
GAAATGGGAG AGTACCTGCT GCATTATGAG GCGGTACAAC AGGCAGATAA TCCTGAAGAG
ACATTACTGG CTTTTCTGCA ATCCACTTAT GAGGCATGCG CCAATACCGC GCATTGGGAT
CGTACATCAC TGGAATGTGA TCTGTCCCAC CTGGAGAATG AATACGGATG TTATAAACAG
CGATGA
 
Protein sequence
MKGRSLKQDK WPVLKFDDLK GTLAAVHLWT QVVGKIRLRK MPWLNHSWHV TLYVTANGLS 
SGSMPYEHGI FQMDFDFHRH QLVITASTGG RDTVDLAPGT VAGFYNAVIT KLKALDIHTA
IYTTPSELEG AIPFEEDHAQ RPYDPQQMED YWQALVRVHN VLTRFRSGFT GKNSPVHFFW
GAFDLAVTRF SGRDAPLHQG SAPNMPAAVM QESYSKEVSS CGFWPGSEQY PHVAFYSYCY
PGNEAFGQQP VQPEAAFYSN EMGEYLLHYE AVQQADNPEE TLLAFLQSTY EACANTAHWD
RTSLECDLSH LENEYGCYKQ R