| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2482 |
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| Symbol | |
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| ID | 8358640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3055939 |
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| End bp | 3057093 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644964668 |
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| Product | glycoside hydrolase family 43 |
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| Protein accession | YP_003122171 |
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| Protein GI | 256421518 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.24102 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAA TAATCAACAC ACTCACCGGC TTATCCCTGC TGACTTTAAC AATGTATACC
TCCGCATCGT CTGCGCAGGA TAACAAGACA GTTCCGCCAG GTACTTATCA GAATCCCTTA
TCCGTGGAAT TCGGAGATCC TTATGTATTA CATGTAAAAG GAGACAAATA CTACATGTAT
GGTACCGGTG GTACCGCGCA GAAAGGATAT GGCGCTTATT CCTCCACAGA CCTGGTAAAC
TGGAAAAATG AAGGCCAGGT ATATTTCGCC AGTAACGTCA ATGGTTGGAG TGATTCTACT
GCCAGATGGG ATGGTGCGTA CTGGGCGCCG GAAGTATATG AAAAAGACGG GAAATTTTAT
ATGTTCTATA GCGCTCAATG GAAAGAGAAT CCTACGAACG AAGAAGAAAA CTTCCGTATC
GGAGTCGCTG TGGCTGACAA ACCCACTGGT CCTTTCGTTG ATCTGTATAA ACGACCAGTT
TTTGATCCTG GTTATCCGGT GATTGATGCA AACGTATTGA TGGACCAGCA GGGTAAGATG
TATCTCTATT ATTCCCGTTG TTGTTATAAA CACCCGGTAG AGAGTGAATT TGCCGCCTGG
GCAAAACAGA AAGGATGGTT CCGGGAAATT GAAGAAAGTT GGGTGTATGG CGTTGAATTA
AAGCCTGATT TTAGCGGGGT AATAGGTGAG CCGGTACTCT TACTGCGTCC GCCTGTGAGA
ATGAGCGATA GACAGGCCGA ATGGGAAAGC CGCTCTGTGA CATCAAAAGA AGTGAACCGT
AGGTGGACGG AAGGTTCCGT GGCATTTAAG AAGGATAACC TGTACTATAT GATGTATTCG
GCGAACTACT TCGGAGGGAA AAATTATGCG GTAGGTTATG CTACATCAGC AAGTCCTTTA
GGCCCGTTTA AAAAAGCGGC GAACAATCCG GTATTGCAGA AGAATGTGGA AAAAGGAGGT
GTCGTAACAG GCACCGGACA TAATAGTGTT ACCTATTCGC CAGATGGAAA GGAAATGTTC
TGTGTGTATC ACGGAAGAAC AGCTGCTTCA GGTGATCAGC GGGTGGTCTT TATTGACAGA
ATGAAGATTC CTAAAAAGGG TACACTTATA GTCGAAGGAC CAACAACAAC ACCACAGCCA
CTACCGGCAA AATAG
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| Protein sequence | MKRIINTLTG LSLLTLTMYT SASSAQDNKT VPPGTYQNPL SVEFGDPYVL HVKGDKYYMY
GTGGTAQKGY GAYSSTDLVN WKNEGQVYFA SNVNGWSDST ARWDGAYWAP EVYEKDGKFY
MFYSAQWKEN PTNEEENFRI GVAVADKPTG PFVDLYKRPV FDPGYPVIDA NVLMDQQGKM
YLYYSRCCYK HPVESEFAAW AKQKGWFREI EESWVYGVEL KPDFSGVIGE PVLLLRPPVR
MSDRQAEWES RSVTSKEVNR RWTEGSVAFK KDNLYYMMYS ANYFGGKNYA VGYATSASPL
GPFKKAANNP VLQKNVEKGG VVTGTGHNSV TYSPDGKEMF CVYHGRTAAS GDQRVVFIDR
MKIPKKGTLI VEGPTTTPQP LPAK
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