Gene Cpin_2471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2471 
Symbol 
ID8358629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3047269 
End bp3048207 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content48% 
IMG OID644964657 
Productaldo/keto reductase 
Protein accessionYP_003122160 
Protein GI256421507 
COG category[R] General function prediction only 
COG ID[COG0656] Aldo/keto reductases, related to diketogulonate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.367665 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAGG TTTCACGGCG GAAGGTCATC AAAATGATAG GGACTGCCAG TCTCAGTGTC 
ATGGCAGCAC CTTTTGCCGG TATATCCCGG ACAATGACCA TCCGCAATTC AACTATGTTA
CAACGAGAGA TTCCTGTTAC AGGAGAAAAA CTGCCAGTGG TAGGACTTGG TACCTGGCAG
CAATTTGATG TAGGACCAGA TGCCAGTGCC CGTGAACCAT TGATCAATGT GCTTAAAAGC
ATGTTGGAAA TGGGGGGCCG CTTAATAGAC TCGTCTCCTA TGTATGGAAA AGCAGAAACC
GTCGTCGGTG AACTGAGTGC CGCATCAGGG AATGCAGACA AATATTTTTA TGCGACTAAA
GTATGGACCA GCGGCGAGCA AAGCGGGATC CGGCAAATGA ATGATTCCAT GCAAAAGATG
CAACTCCGCA AAATGGACCT GATGCAGGTA CATAATCTGC AGGACTGGCA AACGCATCTG
AAAACAATGC GCCAGTGGAA AGAAGCCGGA AAAATACGTT ATACGGGTAT CACGCACTAT
ACATCCGCTG CACATGATCA GTTGGAGCAG ATAGTAAAGT CTAAGGCGGT TGACTTTGTA
CAGTTCAACT ACTCCATCAG AGAACGTAAT GCAGAACGTA GTTTGCTAAA GGCGGCAAGG
GACAGTGGTG TGGCGGTCAT CATCAATGAG CCCTTTGACT CCGGATCATT GTTTCGTATG
GTGAAAGGAC AGTCTTTACC TGCCTGGGCG GCAGACTATG AGATCAACAG CTGGGCGCAG
TTCTTCCTGA AGTATATACT GGCACATCCG GCTGTGACGT GTGTGATACC TGGCACTTCA
AACCCAAAAC ATCTGGCAGA TAATATGGGA GCTGGATATG GCAGCCTCCC TGATGAAAAT
GGTCTTCAGA AAATGCGCGC ATTTGTAGAA CGGCTGTAG
 
Protein sequence
MDQVSRRKVI KMIGTASLSV MAAPFAGISR TMTIRNSTML QREIPVTGEK LPVVGLGTWQ 
QFDVGPDASA REPLINVLKS MLEMGGRLID SSPMYGKAET VVGELSAASG NADKYFYATK
VWTSGEQSGI RQMNDSMQKM QLRKMDLMQV HNLQDWQTHL KTMRQWKEAG KIRYTGITHY
TSAAHDQLEQ IVKSKAVDFV QFNYSIRERN AERSLLKAAR DSGVAVIINE PFDSGSLFRM
VKGQSLPAWA ADYEINSWAQ FFLKYILAHP AVTCVIPGTS NPKHLADNMG AGYGSLPDEN
GLQKMRAFVE RL