Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2426 |
Symbol | |
ID | 8358581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2984716 |
End bp | 2985696 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644964612 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003122118 |
Protein GI | 256421465 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.971153 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0916341 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACACA TTTCAATCCT CGTGCCGGAT GAGGCTGTAT TAGGTACAAT TGCTGATACA CGCTACATGT TCACAACACT CAACGAGTTC CTGGAGGCTG ATGGTAAATC TCCCATGTTC CGCGTGCAAC TGGTGGGATT AGGAGGAGAA GTAAGGCTCA ACCAGGGGCT TTTCTCCATC CACCCTGATG TGCTGATCGG GGATGTATCG CAAACGGACC TGATTGTCAT TCCGCCTTTA AGCGGGAACC TGAAAGCAAC ACTTGAAAGG AATAAGGCAT TTCTTCCCTG GATCATTGAT CATTATCACC AGGGAGCGGA AGTGGCCAGT CTGTGTATAG GCTCCTTTAT GCTGGCGGCA ACCGGCTTGC TGAACGGAAG GGAATGTTCC AGTCACTGGG CTTCAGCGGC GGAATTCAGG GCGATGTTTC CGGAAGTGGA TCTGATAGAC GGCAGGATTA TTACGGAGGA ACAGGGACTG TATTCCAGCG GAGGCGCCAC CTCTTACTGG AATTTGTTGC TGCATCTGGT GGAGAAGATG ACGGATCGTG AATTGGCCAT CAGGATCGCG AAACTGTTTG CCCTGGAAAT AGACCGGAAA ACGCAGTCTC CTTTTGTCAT GTTTAACGGA CAGAAGAAAC ATGAAGATGA ACCTATCAAG AAAGCACAGG AGTTTATAGA ATGTAATCTG ACGGAAAGGA TTTCTGTGGA TGATCTGGCG TCGCGTTTTG CCATCGGAAG AAGGCATTTC GACCGTCGCT TTAAAAAGGC GACCAACAAT ACACCCGCTG AATATATTCA ACGGGTGAAG ATTGAGGCCG CAAAGAAATG GCTGGAAAAC AGCCATAAGA ATGTGAATGA AGTTATGTAC GAGGTAGGCT ATAACGACAC CAAATCTTTC CGGACAGTGT TCAAAAAGAT TACAGGACTG TCGCCGATCG ACTACCGGAA TAAATACAAT AAAGAAGCAG TAGTGGCCTG A
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Protein sequence | MKHISILVPD EAVLGTIADT RYMFTTLNEF LEADGKSPMF RVQLVGLGGE VRLNQGLFSI HPDVLIGDVS QTDLIVIPPL SGNLKATLER NKAFLPWIID HYHQGAEVAS LCIGSFMLAA TGLLNGRECS SHWASAAEFR AMFPEVDLID GRIITEEQGL YSSGGATSYW NLLLHLVEKM TDRELAIRIA KLFALEIDRK TQSPFVMFNG QKKHEDEPIK KAQEFIECNL TERISVDDLA SRFAIGRRHF DRRFKKATNN TPAEYIQRVK IEAAKKWLEN SHKNVNEVMY EVGYNDTKSF RTVFKKITGL SPIDYRNKYN KEAVVA
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