| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2423 |
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| Symbol | |
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| ID | 8358578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2981707 |
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| End bp | 2983020 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644964609 |
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| Product | sugar transporter |
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| Protein accession | YP_003122115 |
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| Protein GI | 256421462 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.144845 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC AATCTAGCTT ACTTTTAATG ACCACGATGG TCGCCTCGCT GGGCGGCTTC
CTGTTTGGCT TTGATATGGC CGTTGTATCG GGCATATTAC CTTTTGTACG GGAGCAGTTC
ACCTTATCCT CTTTCCAGGA AGGATGGTTT GTATCCTCTG CACTGGTAGG GTGTATTATC
GGTGTTATCT TCTCCGGTAA TCTCAGCGAC AGACTAGGCA GGAAAAAGCT GTTATATATG
GCAGCTGCTC TTTTCCTGGT GGCAGCTCTT GGCTGTGCCT TCTTTTCTAC CCTTTTCTGG
ATCATTGCAG CGCGTATCGG CGGTGGGGTG GCTGTGGGGA TTGCTTCGAG CATCGTGCCG
CTGTATCTGT CTGAAATTGC CCCTGATGAT AAAAGAGGCA GATTAGTGAC CTATTACCAG
CTGGCAGTCA CGATCGGTAT CCTGGTTGCC TATTGCAGTA ATGCCAGACT ACTGACTTAT
GCAGAAGCGC ATAAGGCAGA AACTAGCGGT GGTGTGTTAC ATTTCCTTTT TGTGCAGGAA
GTATGGCGGG GGATGTTTGG TTTGGGGATG TTGCCGGCCG CCTTGTTCCT TTTCGGATTG
ATATGGGTGC CTGAGAGTCC GCGCTGGCTG ATGCAGCAGG GGAAAGAAAA GGAATCCACA
GGTTATGCAC CGCTGTTTGT ACCTGCGATG CGCAGGGCAT TGCTGATCGG TATATTACTG
CCCTTGTTCT CACAGTTCAG CGGTATTAAT GCGATTATTT ATTACGGTCC GACGATACTC
AATAATGCAG GTATTACACT TAGTAACTCT TTTGTCAGCC AGATCATCTT TGGTGCGGCC
AATGTCTTCT TTACCATATT TGCGATCTGG AAAGTAGATA GTCTGGGGAG AAGACCTTTA
TACCTCTGGG GAACGGCGGG TGCTACCATC AGTCTTATCC TGACGGGGCT CTGTTTCTAT
CAGAACGTGG CTACCGGTAT TCCGTTGTTA TTGTCTGTGC TGGCTTTCCT GGCTTTCTTC
GCGTTTTCTA TTGGTCCGCT GAAGTTTGTG ATCGCAGCAG AGATCTTTCC GGATAATATC
CGTGCAAAGG CTTTATCCCT GAGTATCATG GTAATGTGGA TATCTGATAC GATTGTCGGA
CAACTCACGC CGATATTACT GCGTAACCTG GGTACGGCAC AGACATTCTG GTTTTTCGCC
GTATTTTGTC TGGCGGCATT TATAGCGGTT TACCGCTTAT TGCCGGAAAC GAAAGGACAG
TCATTTGAAC AGATAGAACA GTATTGGAAA AATTCAATCA AAAAGACAGC GTAA
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| Protein sequence | MKKQSSLLLM TTMVASLGGF LFGFDMAVVS GILPFVREQF TLSSFQEGWF VSSALVGCII
GVIFSGNLSD RLGRKKLLYM AAALFLVAAL GCAFFSTLFW IIAARIGGGV AVGIASSIVP
LYLSEIAPDD KRGRLVTYYQ LAVTIGILVA YCSNARLLTY AEAHKAETSG GVLHFLFVQE
VWRGMFGLGM LPAALFLFGL IWVPESPRWL MQQGKEKEST GYAPLFVPAM RRALLIGILL
PLFSQFSGIN AIIYYGPTIL NNAGITLSNS FVSQIIFGAA NVFFTIFAIW KVDSLGRRPL
YLWGTAGATI SLILTGLCFY QNVATGIPLL LSVLAFLAFF AFSIGPLKFV IAAEIFPDNI
RAKALSLSIM VMWISDTIVG QLTPILLRNL GTAQTFWFFA VFCLAAFIAV YRLLPETKGQ
SFEQIEQYWK NSIKKTA
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